Collimonas pratensis: CPter91_3185
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Entry
CPter91_3185 CDS
T04306
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
cpra
Collimonas pratensis
Pathway
cpra00906
Carotenoid biosynthesis
cpra01100
Metabolic pathways
cpra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CPter91_3185 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cpra01006
]
CPter91_3185 (hpnD)
Enzymes [BR:
cpra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
CPter91_3185 (hpnD)
Prenyltransferases [BR:
cpra01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CPter91_3185 (hpnD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AMP05518
UniProt:
A0A127QWA2
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All DBs
Position
3284296..3285129
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AA seq
277 aa
AA seq
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MSPDDYCQQKAAQSGSSFYYSFLFLPVERRRAITALYAFCREVDDTVDDCTDESVARSKL
MWWRKEIAAMLAGNPSHPVTQALQPHLLTYGLEGKHLQAIIDGMEMDLNQTRYLDYPGLK
QYCWHVAGVVGILSASIFGVSQPQTLQFAEKLGLAFQLTNIIRDVGEDGRKGRIYLPVNE
LQQFNVTAADILNARYSENFVNLMRFQVARAQQAYDEAFALLPKQDRRAQRPGLMMAAIY
RALLGEIERDGFHVLNQRISLTPIRKLWLAWKTYVRG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagacgattattgccagcaaaaagccgcccaaagcggttccagtttttactac
agcttcctgttcctgccggtcgagcgtcgccgcgccattactgccctgtatgcgttttgc
cgtgaagtggacgacaccgtcgacgactgcaccgatgaaagcgtggcgcgcagcaagctg
atgtggtggcgcaaggaaatcgccgccatgctggccggtaatccctcgcatccggtgacc
caggcgctgcagccgcacctgctgacctatggactggaaggcaagcacctgcaagcgatc
atcgacggcatggaaatggatctaaaccagacccgctacctggattatcccggcctcaag
caatattgctggcatgtggcgggtgtggtcggcattctgtcggccagcatctttggcgta
agccagccgcaaaccctgcagtttgccgaaaagctcggcctcgccttccagctcaccaac
atcatccgcgacgtcggcgaagatggccgcaagggtcgtatttatttaccggttaacgaa
ctgcagcaattcaatgtcaccgcggccgatatcctcaatgcccgctacagcgagaatttc
gtcaacctgatgcgcttccaggtggcgcgcgcacagcaagcttacgatgaagcgtttgcc
ttgctgcccaagcaggaccggcgcgcccagcgccccggcctgatgatggcggcgatctac
cgcgccctgctcggtgagatcgagcgcgatggtttccatgtgctgaaccagcgcatttcg
ctgacgcctattcgcaaactgtggctggcctggaagacttatgtgcgtggctaa
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