Colwellia psychrerythraea: CPS_0393
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Entry
CPS_0393 CDS
T00258
Symbol
fadB
Name
(RefSeq) fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00071
Fatty acid degradation
cps00280
Valine, leucine and isoleucine degradation
cps00310
Lysine degradation
cps00362
Benzoate degradation
cps00380
Tryptophan metabolism
cps00410
beta-Alanine metabolism
cps00640
Propanoate metabolism
cps00650
Butanoate metabolism
cps00907
Pinene, camphor and geraniol degradation
cps00930
Caprolactam degradation
cps01100
Metabolic pathways
cps01110
Biosynthesis of secondary metabolites
cps01120
Microbial metabolism in diverse environments
cps01200
Carbon metabolism
cps01212
Fatty acid metabolism
Module
cps_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CPS_0393 (fadB)
00650 Butanoate metabolism
CPS_0393 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CPS_0393 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CPS_0393 (fadB)
00310 Lysine degradation
CPS_0393 (fadB)
00380 Tryptophan metabolism
CPS_0393 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CPS_0393 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CPS_0393 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CPS_0393 (fadB)
00930 Caprolactam degradation
CPS_0393 (fadB)
Enzymes [BR:
cps01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CPS_0393 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CPS_0393 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CPS_0393 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CPS_0393 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
AAZ26244
UniProt:
Q489W3
LinkDB
All DBs
Position
complement(396542..398710)
Genome browser
AA seq
722 aa
AA seq
DB search
MIYQGKSLSAQLLEDGIVEFKFDAQGSVNKFDQATFEEYIAVVAAINNCSEAKGVIVTSG
KSTFIVGADITEFLVSFSQPEDALASWAKKASDVFDSFEDIQLPTIAAINGIALGGGCEM
TLACDYRVAATTASIGLPEVKLGLMPGFGGTVRLPRLIGFDNAATWMSTGKAFKPAAALA
QGAIDAVVEPENLQAAAISMLKLAIDGKLDWRAKRQPKLEALKLSPTELIMSSTTCKGMI
AAKAGKHYPAPMVMINTLIASANLDRTGAMAAENTGFAKLAKTDAATAQIGLFMADQVIK
GKAKKASKLATKAVNKAAVLGAGIMGGGIAYQSAYKGTPIIMKDINDQALDLGLTTATGI
LTKQVERGRMNAKKMAGVLNNITPSLSYDSVKDVDIVVEAVVENPKVKGMVLAEVEGVIG
EDAILTSNTSTISIDLLAQSVKRPQNFCGMHFFNPVNKMPLVEVIRGKDTSDETVAAVVA
YAAKMGKSPIVVNDCPGFYVNRVLFPYFAGFSQLVLEGADFTAIDKVMEKQFGWPMGPAY
LLDVVGVDTADHCTGVMSSGFPTRMKKIDNDPVSTLYANERLGQKNGKGFYDHIKDKRGR
PMKVPAPVAYELLGQHCADKKDFSSEEIIARMMIPMVNEVVRCLEEGVVDTAAEADMGLI
YGVGFPPFRGGAIRYLETLGLDNFIAMADKYTDLGEIYHVTDGLREMAKSGKSYFTTDVK
LA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatatatcaaggcaagagcctttcagcccaattactcgaagacggcattgtagaattt
aagttcgatgctcagggttcagtaaataagtttgatcaagcaacttttgaagaatatata
gccgtagtggccgcaattaataactgcagtgaagctaaaggcgtaatagttacttcaggc
aaatcaacatttattgttggtgctgacattacagaatttttagtttcatttagtcagcca
gaagatgccttagcatcttgggcaaaaaaagcctcagacgtttttgactcatttgaagat
attcaattacccactatagccgctatcaatggcatcgctttaggcggtggttgtgaaatg
acgctggcatgtgactaccgagttgcagcgactactgccagtatcggactgccagaagtt
aaactaggtttgatgcctggttttggtggtactgtacgactacctcgacttattggtttt
gataatgcggcaacttggatgtctacaggtaaagcattcaaacctgcagcagcactagca
caaggtgctattgatgccgttgtagaaccagaaaatttacaagctgctgctattagcatg
cttaaactggcaattgacggcaaactagattggcgcgcgaaacgccagccgaaattggaa
gcattaaagttatcgccgacagaactcatcatgtcatcaactacctgtaaaggtatgatt
gccgctaaagcgggtaaacattatccagcaccaatggttatgataaatacattgattgct
agtgctaacttagatcgcactggtgcaatggctgctgagaatactggttttgctaaatta
gcgaaaactgatgcagcaacagcacaaattggtttgtttatggcagaccaagtgattaaa
ggcaaagctaagaaagcaagtaaacttgcgacaaaagctgtcaataaagccgctgtatta
ggtgctggtattatgggtggtggtattgcataccaatcagcttataaaggcaccccgatc
attatgaaagatattaatgatcaagcacttgatttaggtttaacaaccgctacgggcatt
ttaactaaacaagttgaacgtggtcgtatgaatgctaagaaaatggcaggtgtattaaac
aacatcactccatcattaagttatgacagtgttaaagacgtagatattgttgttgaagcg
gttgtagaaaaccctaaagttaagggcatggttttagctgaagttgaaggtgtgatcggt
gaagatgcgattctaacgtcaaatacttctactatctccattgatttattggcacagagt
gtaaaacgtccacaaaacttctgtggtatgcactttttcaaccctgtaaataaaatgcca
ttagtagaagttattcgtggcaaagatacttcagatgaaacggttgcggcagtcgtggct
tatgccgctaaaatgggtaaatctccgattgttgttaatgattgtcctggtttctatgtt
aaccgtgttttattcccatactttgctggttttagccaattagtacttgaaggtgctgac
tttaccgctatcgataaagtcatggaaaaacaattcggttggccaatgggccctgcctat
ttacttgatgttgttggcgttgatactgctgatcactgtacaggtgttatgtcatctggt
ttccctacgcgaatgaaaaaaattgacaacgaccctgttagtactctttatgctaacgag
cgcttaggtcaaaagaacggtaaaggcttttacgatcacatcaaagacaagcgtggtcgt
ccaatgaaagttccagctcctgttgcttacgagttacttggtcaacattgtgctgataaa
aaagactttagcagcgaagaaatcatagctcgaatgatgatccctatggttaatgaagtg
gttcgttgtttagaagaaggtgtagttgatactgcagctgaagccgatatgggcttaatc
tatggcgttggtttccctccatttagaggtggtgcaattcgctacctagaaactctaggt
ttagataacttcatcgcaatggctgataagtatactgatttaggtgaaatttatcatgtg
actgatggccttcgtgaaatggcaaaatcaggtaaatcttacttcactaccgatgttaaa
ttagcttaa
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