Colwellia psychrerythraea: CPS_2480
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Entry
CPS_2480 CDS
T00258
Symbol
soxA1
Name
(RefSeq) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00260
Glycine, serine and threonine metabolism
cps01100
Metabolic pathways
Module
cps_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CPS_2480 (soxA1)
Enzymes [BR:
cps01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CPS_2480 (soxA1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CPS_2480 (soxA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
Pyr_redox_3
DAO
HI0933_like
NAD_binding_8
GIDA
Pyr_redox
AlaDh_PNT_C
Thi4
FAD_binding_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AAZ28530
UniProt:
Q47WX9
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All DBs
Position
2596916..2599939
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AA seq
1007 aa
AA seq
DB search
MSQVNRIAGSSKRINRNRTLTFSFNGKEYTGFEGDTVASALLANGVDVVGRSFKYSRPRG
IITSDSQEPNAIFQIGSTQATTIPNPRATQTDLYQGLTASSTNGWPNVDFDLMGTVGKLG
GSMMPPGFYYKTFMFPQSLWMSYEHLIRKGAGLGASPQQNDPDSYDKMHHHCDVMIVGGG
PAGLAAALSAAQTGARVIISDEQNEFGGSLLCSTQQIDGQLPSQWVEKTVAQLSEMDNVM
LLPRSTVFGYYDHNLVGINERRTDHLGEHQLQSTRQRVHKVRAKQVILATGAHERPLVYG
NNDVPGCMLANAISTYINRYDVVPGKQLVLMTTNDNAYKTAIDWHQAGRKVVAIVDTRST
SNGDLVNKVKKLGIDIIFGHGVIEVKGSKRVKGVEVAPINASNHSVTGPAKHIVCDTVAS
SGGWSPVIHLSSHTGSRPVWNDDIAGFVPGDTVQKQHSCGGLEGVYALSKVISDGFTTGA
VAAEAAGKGDGRYAGNSPTTSDPQEDASMALFHIPHSKKTSRAPKQFVDYQNDVTAAGIE
LANREGFESIEHVKRYTALGFGTDQGKLGNINGMAITAKSLGKTIPETGTTIFRPMYTPT
TFGALAGADVKHLFDPARFSAMHKWHLENGAEFEDVGQWKRPWYFPQPGETMQQSLEREC
LATRNSVGILDASTLGKIDIQGKDAREFLNRVYTNPWSKLGVGKCRYGVMCKEDGMVFDD
GVTVCLDDNRFIMTTTTGGAAGVLQWLELWHQTEWPELEVYFSTVTDHWSTMTISGPNSR
KVLEKICDIDVSNDSFKYMDWRAATVAGVKARIFRISFTGELSFEINVQANYGMHAWKAV
MAAGEEFNITPYGTETMHILRAEKGFIIVGQDTDGSVTPQDLDMDWVVGKKKDFSFIGKR
SWTRFDNKRDDRKQMVGLKPKDPTFVLPEGAQIVFEKNQSIPMKMVGHVTSSYYSACMGY
SFALAVVKGGISRKGESVYLPLSDGTTVEAEICSPVFYDPKGDRQNV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagttaatcgaatcgctggaagcagcaaacgcattaatcgcaaccgcacctta
acctttagctttaacggcaaagaatatacaggttttgaaggcgataccgtcgcatcagcc
ttgttagctaatggtgttgatgtcgttgggcgtagttttaagtactcacgtcctcgcggt
attattaccagtgactcgcaagagccgaacgccatttttcaaattggctcgacgcaagcg
accactattcctaacccacgcgcgacacaaaccgacttgtaccaaggattaaccgcaagc
tcaaccaacggttggcctaatgttgatttcgatttaatgggcaccgtgggcaaattaggt
ggctcgatgatgccgcccgggttttattacaaaacctttatgtttccacaatcgttatgg
atgtcatacgagcacttaattcgcaaaggcgctggtttaggggcaagtcctcagcaaaat
gacccggacagttatgacaaaatgcaccatcattgtgatgtgatgattgtcggtggtggt
cctgcgggcttagccgcagcgttatctgctgcgcaaacaggcgcacgcgttatcatcagt
gatgagcaaaatgaatttggcggcagtttattatgctcaacgcagcaaatagatggccaa
ttgccgagtcaatgggtagaaaaaaccgtggcacagcttagcgagatggataacgtgatg
ttacttcctcgcagcacggtgtttggttattacgaccataacctagtgggcattaatgaa
cgtcgcaccgaccatttaggtgagcatcaactgcaaagcacccgtcaacgcgtgcataaa
gtgcgcgctaaacaagtgattttagccaccggtgctcatgagcgtccgcttgtttatggt
aacaatgacgtgccaggttgtatgttagccaatgcaatttctacctacattaatcgctat
gatgtagtaccaggcaagcaattggtgttaatgaccaccaatgataatgcctacaaaacc
gcgattgattggcatcaagccggtcgtaaagtggtcgctatcgttgatacgcgaagcacc
tcaaatggcgacttggtcaataaggtcaaaaaactgggcatcgatatcatctttggccat
ggcgtgattgaagtcaaaggcagcaaacgcgtcaaaggcgttgaggttgcgccaatcaat
gcgagtaatcacagtgttactggtccagcgaaacatattgtctgtgatacggttgccagc
tcaggtggttggagccctgttattcatttgtcatcacacacaggctcgcgtccggtgtgg
aacgacgacattgcggggtttgtacccggtgataccgtgcaaaagcaacacagttgcggt
ggactggaaggcgtttacgcgttatcaaaagtcatcagtgatggtttcaccactggcgct
gtcgcagcagaggccgcaggcaaaggtgatggacgttatgcggggaactcgccaacaacc
agcgacccacaagaagatgcgtccatggcgctgtttcacataccgcacagtaaaaaaacc
agtcgcgcgccaaaacagtttgttgattatcaaaatgatgtcaccgccgcaggtattgaa
ctggcaaaccgtgaaggctttgaatcgattgagcatgtcaaacgctacaccgcgttaggt
tttggtacggaccaaggcaagttaggtaatatcaacggcatggcaattaccgctaaatcg
ttaggtaaaactatccctgaaacgggcaccactatcttccgccctatgtatacccccacc
acgtttggcgccttagcgggtgcggatgtgaagcacttgttcgacccagcacgttttagc
gctatgcataaatggcatttagaaaatggcgctgagtttgaagatgttggccaatggaaa
cgcccgtggtacttcccacagccaggcgaaaccatgcagcaatcactcgagcgtgaatgt
ttagcaacacgtaacagtgtcggtattttagatgcttcgaccttaggtaaaattgatatt
caaggcaaagatgcacgcgaatttttaaaccgcgtctataccaacccatggagcaagtta
ggcgtaggcaaatgtcgctacggcgttatgtgtaaagaagacggtatggtctttgatgat
ggggttaccgtctgtcttgacgataatcgttttatcatgaccaccaccactggcggggcg
gcgggcgtattgcaatggttagagctatggcatcaaaccgagtggcctgagctggaggtg
tatttctcaaccgtgactgaccattggtcaaccatgactatctcaggacctaactctcgt
aaagtcttggagaaaatctgtgatattgatgtcagtaatgacagtttcaagtacatggat
tggcgcgcagcgacggttgcgggggttaaagcacgcattttccgtatctcgtttaccggc
gagctgtcgtttgaaattaacgtgcaagcaaactatggcatgcatgcctggaaagcggtg
atggcggcgggtgaagaatttaatatcaccccgtatggcaccgaaaccatgcatatttta
cgtgcagaaaaaggctttatcattgtcggacaagacaccgatggctcggtgacaccacaa
gatttagacatggactgggttgtgggtaagaaaaaagactttagctttattggtaaacgc
tcttggacgcgctttgacaataaacgtgacgatcgtaaacaaatggtgggcttgaaaccg
aaagaccctacttttgtactgcctgaaggcgcacaaattgtctttgagaaaaaccaatcc
atcccaatgaaaatggtgggtcacgttacctcaagttattacagtgcttgtatgggctac
tcgtttgccttagcagtcgttaaaggcggtattagccgcaaaggtgagagtgtctatttg
ccattaagtgatggcaccaccgtggaagctgaaatttgcagcccagtattttatgatcca
aagggagaccgtcaaaatgtctaa
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