Lachnoclostridium phytofermentans: Cphy_3396
Help
Entry
Cphy_3396 CDS
T00619
Name
(GenBank) glycoside hydrolase family 4
KO
K22933
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy00040
Pentose and glucuronate interconversions
cpy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Cphy_3396
Enzymes [BR:
cpy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
Cphy_3396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_4
Glyco_hydro_4C
Motif
Other DBs
NCBI-ProteinID:
ABX43749
UniProt:
A9KTB9
LinkDB
All DBs
Position
complement(4154932..4156332)
Genome browser
AA seq
466 aa
AA seq
DB search
MKYNNGKVSDVKIAYIGGGSRGWAWTFMTDLAMEPNMSGKISLYDIDQEAAKNNEIIGNM
ITRRDDTVGKWNYETANTMEAALTGADFVVISILPGTFDEMEADVHMPERLGIYQSVGDT
AGPGGMMRALRTIPMFVTIANAIKEYSPKAWVINYTNPMSMCVKTLYHVFPEIKAFGCCH
EVFGTQKVLKGIAEQELKIDRIDRNDIHVNVLGINHFTWFNYASYQGIDLFPIYCKYIED
HFEEGFEEKDENWANASFACKHRVKFDLFNEFGLIAAAGDRHLTEFMPSERYLKDKETVA
DWNFGLTTVEWRKKDLEDRLNKSHRLVSGEEEIKLEPSGEEGILLIKALCGLTRVISNVN
IPNTNLQIENLPSTAIVETNAVFERDSIRPIMAGEMPENVVKLTMPHILNHEYIMEAALT
FDKSLVVKAFEQDPLVKDMATKEEVEKLVEDMLDATKAYLPKEWNL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataataatggaaaagtttctgatgtaaaaattgcttatataggaggcggatct
cgtggctgggcatggacatttatgacagatttggctatggaaccaaatatgagcggtaag
atatctctatatgatattgatcaagaggctgcaaaaaataacgaaatcattggtaatatg
ataaccagacgagatgatacggttggaaaatggaactacgagacagctaatactatggaa
gcggcgttaacgggggccgactttgttgtaatttctatactacctggaacctttgatgag
atggaagcagatgtacatatgccggagcgtctaggaatctaccagtccgttggagatact
gctggaccaggaggtatgatgagggctcttcgtaccattccgatgtttgttacaatagct
aacgcaattaaagagtactcgcctaaagcttgggtcattaattataccaacccaatgtct
atgtgtgtaaaaacgttatatcatgtatttccggaaattaaagcatttggttgctgtcat
gaggtatttggaacacagaaggttctaaaaggaatcgctgaacaggaattaaagatagat
cgtattgatcgaaacgatatccatgtcaatgtacttggcattaatcattttacttggttt
aattatgcttcctatcaagggattgatttgttccctatttattgtaagtatattgaagat
cattttgaagaaggatttgaagaaaaagatgagaactgggcaaatgcatcctttgcttgt
aagcaccgtgtgaagtttgacttatttaacgaatttggtttaattgcagcggcaggtgat
cgacacctgacagagtttatgccaagcgaacgatatttaaaggataaagagacggtagca
gattggaactttggtctaacaacagttgaatggagaaaaaaagatttagaagaccgttta
aataagagccatcgattggttagcggagaagaagagattaaacttgagccatctggtgaa
gaaggcatactattaatcaaagcactttgtggtttaacaagagttattagtaatgtgaat
attcctaatacgaatcttcagattgaaaatcttccaagtactgcaattgtggaaacgaat
gcggtgtttgagagagattccatacgacctattatggcgggtgaaatgccagaaaacgtt
gttaaattaacaatgcctcatattttaaatcacgagtacattatggaagcagcgcttacc
ttcgataaatccttggtggtgaaagcatttgaacaggacccattagtaaaggatatggca
acaaaagaagaagtagaaaaacttgtagaggatatgttagatgctacaaaggcatatctt
ccaaaagagtggaatctatag
DBGET
integrated database retrieval system
