Cherax quadricarinatus (Australian red claw crayfish): 128690595
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Entry
128690595 CDS
T09502
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03020
RNA polymerase
cqd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128690595
09124 Replication and repair
03420 Nucleotide excision repair
128690595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqd03021
]
128690595
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128690595
Enzymes [BR:
cqd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128690595
Transcription machinery [BR:
cqd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128690595
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128690595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
EutB
Motif
Other DBs
NCBI-GeneID:
128690595
NCBI-ProteinID:
XP_053635286
EnsemblRapid:
LOC128690595
LinkDB
All DBs
Position
26:complement(22061189..22099175)
Genome browser
AA seq
1916 aa
AA seq
DB search
MALESKATLRTVRRVQFGILSPDEIRRMSATEGGIKYAEVYENGRPKLGGLMDPRQGCLD
RNTRCTTCAGNMTDCPGHFGHLELAKPVFHVGFLTKTMKILRCVCFYCSKLLFNAQYPKI
REIVTKSKGQPRKRLQHVYNLCKGKMICEGGDEIDVNKDPDDPNISKKGSGHGGCGRYQP
NIKRVGLELVAEWKHVNEDTQDRKQILTAERVYEIFKHITDEECYLLGMDPKYARPDWMI
MTVLPVPPLPVRPAVVMHGSARNQDDLTHKLADIIKANNELVRNEQAGAAAHIINENLKM
LQFHVATLTDNDMPGMPRALQKSGRPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITA
DPNLRIDQVGVPRSIAQNLTYPEIVTPFNMTKMMDLVKRGNNQYPGAKYIVRDNGARIDL
RYHPKPSDLHLQCGYKVERHITDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVT
SPYNADFDGDEMNLHVPQSMETRAEIENLHVTPRMIITPQANKPVMGIVQDTLTAVRKMT
KRDVFLEKAEMMNLLMFLPIWDGRMPQPAIFKPKPMWTGKQLFSLIIPGNLNLVKTHSTH
PDDEDDGPYKWISPGDTKVLVEHGELIMGILCKRTLGASSGSMLHVAWMELGHEIAGRFY
GNIQTVVNNWLLLEGMSIGIGDTISDPATYRVIQDTIRKAKEDVIEVIHKAHNDELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVG
QQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVSQVIQLRYGEDGLAGEYVEFQKMPTV
KLSNQRFEDKYRFDVTNERYLRRLFNEDVVRDLIGSPEAISILEGEWQKLIEDRNGLRQV
FPKGDTKVVLPCNLERMIWNVQKIFHINKRTPTDLSPVRVVEGVREMLNKCTIVTGEDRI
SLQANENATFCFQCLVRSTLCTKKVAEEYKLTTESFNWLVGEIETRFHQAIAAPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLVGASAR
DAEKAKNVLCRLEHTTLRKVTSNTAIYYDPDPQNTCITEDQEFVNVYYEMPDFDVSRISP
WLLRIELDRKKMTDKKLTMEQISQKINSGFGDDLNCIFNDDNAEKLVLRIRIIVGDDKLA
DDAEEQVDKMEDDTFLRCIEANMLNDLTLQGIEAITKVYMHLPQTDEKKRIIINEHGEFK
AIAEWLLETDGTALMKVLSERDVDPVRTSSNDILEVFEVLGIEAVRKCIEKEMNAVLMFY
GLYVNYRHLALLCDVMTSKGHLMAITRHGINRQDTGALMKCSFEESVDVLMEAASCAEVD
PIRGVSENIMLGQLPKIGSGSFDLVLDDAKCKLGMEIPMPGTGMMMGGGIFGAASPSSGM
TPAQTPWASGATPSMSPYGAWTPGVGSGMTPGGPSFSPAAASETTSLSPGYSPAWSPQPG
SPGSPGCTSPYIPSPANALSPSYSPSSPAFQPTSPSMTPASPGYSPTSPTYSPTSPQYSP
TSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYAPNYSPSSPG
YSPTSPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPNYSPTSPTYSPGSPSYSPS
SPKYSPTSPTYSPTSPSYSPSSPKYSPTSPNYSPTSPKYSPTSPTYSPSSPRYSPSSPKY
SPTSPTYSPSSPKYSPTSPTYSPTTPGYSPTSPLYSPSYEDDEEEQRRKQKKKSKR
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggcattggaaagcaaggcaaccttgcggactgtccgcagggtgcagtttggtatttta
agcccagatgaaattcgccgcatgtctgcaactgaaggtggcataaagtatgcagaagtg
tatgaaaatgggagaccaaagttgggtgggctcatggacccacgacaagggtgcttggat
cgcaacacccgttgcactacatgtgctggtaacatgactgactgtcctgggcattttgga
cacctggagttagctaagccagtcttccatgttggttttttaaccaaaaccatgaaaata
ttgagatgtgtttgcttttattgcagcaaacttctcttcaatgcacaatacccaaaaatt
cgtgaaattgtcacaaaatcaaaggggcagccccgaaagcgtcttcaacacgtctataac
ttgtgtaaggggaaaatgatttgtgaaggtggagatgaaattgatgttaataaagatcca
gatgaccccaacataagtaaaaaaggatctggtcatggtggttgtggtcgataccaacca
aacataaaacgtgtgggtttggaacttgttgctgaatggaagcatgtaaatgaagataca
caggatcggaagcagatactcactgctgagcgagtgtatgagatattcaaacacatcaca
gatgaggagtgttacttgctgggcatggatcccaaatatgcccgccctgactggatgatc
atgactgtgttacctgtgccacctctgccagtacgaccagctgttgtcatgcatggatca
gcccgtaatcaagatgatctgacccataaactggctgacattatcaaagccaacaatgaa
cttgtacgcaatgagcaagctggtgcagctgctcacattataaatgaaaacctgaagatg
ttacagtttcatgtggcgactctaacagataatgatatgcctggaatgccaagagcatta
caaaaatcaggtagacctctcaaagctatcaaagctcgcctcaagggcaaggaaggcagg
attcgaggtaatctcatgggaaaacgtgtagatttctcggctcgaactgtgattactgca
gatccaaaccttcgtattgatcaagttggagtgcctcgatcaattgcccagaatcttaca
tacccagaaatcgtaactccattcaacatgacaaaaatgatggaccttgtgaagcgcggt
aacaaccagtatccaggagcaaagtacatcgtgcgtgacaatggggctcggattgattta
cgttatcatccaaagccatctgatctccaccttcagtgtggctacaaagttgaaaggcac
atcacagatggtgacttagttattttcaaccgtcagccaactttgcacaagatgtctatg
atgggacacagagttaaggttttgccttggtcaaccttccgaatgaacttgtcagtaaca
tcaccatacaatgctgattttgatggagatgaaatgaacttacatgtaccccagagtatg
gagacaagagcagagattgaaaacttgcatgttacaccacgcatgatcatcacaccacag
gccaacaagccagtcatgggtattgtacaggacaccttgactgctgtccgaaaaatgaca
aaacgtgacgtattcttggagaaggctgagatgatgaacttgttaatgttcctgccaata
tgggatggacgcatgccccaaccagccatcttcaaacccaagccaatgtggactgggaaa
cagctgttctctctcatcattcctggtaacctaaatttggttaaaacccattccacccac
cctgatgatgaagatgatggaccctacaaatggatctctccaggggataccaaggtcttg
gtggagcatggagaattgattatgggtattttgtgcaagaggacccttggtgcttcatct
ggatctatgttgcacgttgcctggatggagttgggacatgaaattgctggaagattctat
ggcaacatccagactgttgttaataattggctactcttggaaggtatgagtattggaatt
ggtgacaccatttctgatcctgcaacatacagagttatccaggataccattcgcaaagcc
aaagaggatgtgatagaagtgatccacaaagctcataatgatgaacttgagcctactccc
ggtaacacgttgaggcagaccttcgagaatcaagtgaatcgtatcctaaatgatgctcga
gacaaaactggtggttctgctaagaagtcattaacagaatataataatttaaaggctatg
gtagtctctggatcaaagggatcaaatattaacatttctcaagttattgcttgtgtggga
caacagaatgttgaaggtaagaggattccatttggtttccgtaagaggacgcttcctcac
ttcatcaaggatgattatggtccagaatccagaggttttgtggaaaattcctaccttgcc
ggtctcactccctctgagttttatttccatgccatgggtgggcgtgagggtctcattgat
actgctgtgaaaactgcagaaacaggatatatccagcgacgtttgataaaggctatggag
agcgtaatggtaaattatgatggcacagtaagaaacagtgtgagtcaagtgattcagctc
aggtatggtgaagatggcttggctggagagtatgtagaatttcagaaaatgccaactgtt
aaactgtcgaatcaacgcttcgaagataagtacagatttgatgttaccaatgaaagatat
ctacgtaggctgtttaatgaagatgtcgttagagacctgattggttcaccagaggccata
agtatcctcgagggagaatggcaaaaattaattgaagacaggaatggacttcgacaagta
ttccccaagggtgacaccaaagtggtgctcccatgcaacttggaacgaatgatctggaat
gtacagaagatttttcatattaacaagaggactccaacagatttgtcaccagtgcgtgtt
gtagagggtgtaagagaaatgttgaataaatgtaccattgtaacaggagaggatcgcatc
agtttacaggctaatgaaaatgctactttctgctttcaatgtcttgtaaggtcaactctg
tgtacaaagaaagtagctgaagagtacaaattaactacagaatccttcaactggcttgtt
ggtgaaatagagaccagattccaccaagcaattgctgctcctggagaaatggttggtgct
ttggcagctcagtcacttggtgaacctgctacacagatgacactgaacactttccatttt
gctggtgtgtcatccaagaatgtaacattgggtgtgccaaggctgaaagaaatcatcaac
atcagtaagaaacctaaggctccatccctcacagtgtttctggttggagcatcagcaaga
gatgctgaaaaggctaagaatgttttatgtcgccttgaacacactactttacgcaaggta
acatccaacactgctatctactatgacccagacccacagaacacttgtattactgaggat
caggagtttgttaatgtctactatgaaatgccagactttgatgtctccaggatctctcct
tggctacttcgcattgagcttgatcgtaaaaaaatgacagataaaaagctgactatggag
caaatttcccagaagattaactcgggttttggagacgatttgaattgcattttcaatgat
gacaatgcagaaaaactcgttctgcggatccgtattattgttggtgatgacaaattggct
gatgatgctgaggaacaggtggacaaaatggaagatgatactttcttacgatgcattgaa
gcaaatatgctgaatgaccttacactacagggcattgaggccatcaccaaagtgtatatg
catttgccccagactgatgagaaaaagaggatcatcattaatgaacatggagaatttaag
gcaatagctgagtggctacttgagactgatggtactgccttaatgaaagttctttcagag
agagatgtagatcctgtgagaacttcctcaaatgatatcttggaagtatttgaagtcctt
ggaattgaagctgtccgtaaatgtatcgaaaaggaaatgaatgcagtgcttatgttctat
ggactgtacgtgaactaccgtcacttggctttgctttgtgacgttatgaccagcaaaggt
cacttgatggcaatcacacgtcatggtataaacagacaagacactggagcattaatgaag
tgttcatttgaagaatctgtggacgtgttaatggaagctgcctcttgtgctgaagtagac
cctattcgtggtgtttcggaaaacatcatgttaggtcagcttcccaaaataggttctggg
tcatttgacctggtcttagatgatgctaagtgcaagttgggcatggagatccccatgcct
ggaacaggtatgatgatgggtggaggaatttttggtgctgcatcaccatcctctggcatg
acaccggcccaaaccccatgggcctcaggagcaacaccatcaatgtcgccatatggtgca
tggaccccaggtgtaggaagtggtatgacaccaggtggaccatccttctctccagctgca
gcaagtgagaccacaagtctatcaccagggtattctccagcatggtctccacagcctggc
agcccagggtctccaggctgcacaagtccatacattccaagtccagccaatgcactatca
ccctcctactctccatcatcaccagcttttcagcctacatctccaagcatgactccagca
tctccaggatattcaccaacatcacctacctacagtccaacaagccctcagtactctcca
acctcaccacagtactctccaacaagtccatcttattctcccacatcaccatcttacagt
cccacctctccatcatactcgccaacatcaccatcatatagtcccacctctccctcgtac
tctccaacatcaccatcctattctccaacttctccatcttactcacctacatctccatca
tattctcctacaagtccctcatattcacctacttccccaagttacagtcccacttctccc
tcctactctcctactagtccatcttattctcccacatcaccatcttattctcccacatca
ccatcttattcacctacatctcccagttatgctcctaactactctccatcatctcctgga
tattctccaaccagcccttcctactccccaactagtccatcttattcaccgagttctcct
cagtactctccagcttccccatcctattcaccatcttcccccaagtattcacccacaagc
cccaactattcaccaacaagcccaacctactcacctggctctccttcatattcccccagt
tcaccaaaatattcacctacaagtccaacttactcacccacctctccttcgtattcccca
tcctctcctaaatattctcctacatcacccaattactcaccaacgtcacccaagtactct
ccaacatcacccacatacagtccctccagtcctcgatatagcccttcaagtccaaaatat
tccccaacatctccaacctacagtccaagtagccccaagtatagcccaactagcccaact
tacagtccaactactccaggttatagtccaacatcacctttgtattctccaagttacgaa
gatgatgaagaggaacaaaggagaaagcagaaaaagaaatccaagcgctaa
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integrated database retrieval system
