Cherax quadricarinatus (Australian red claw crayfish): 128695835
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Entry
128695835 CDS
T09502
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128695835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqd03021
]
128695835
Enzymes [BR:
cqd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128695835
Transcription machinery [BR:
cqd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128695835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
128695835
NCBI-ProteinID:
XP_053642694
EnsemblRapid:
LOC128695835
LinkDB
All DBs
Position
47:complement(9051022..9145290)
Genome browser
AA seq
1154 aa
AA seq
DB search
MITSKKTVELSLRHLKDQNFGKIPEVQNEAIQALAAPHVESFNFFLEEGLQALLSTLPAL
EFEMLSGSRISLMVTDITVGKPRLPPGVAEVSNLDIYPKECVERGGSYTAPASAVIEWTC
DNEEVLSFRQSLGDLPIMIKSKNCNLHNLTPEELVKHGELVNETGGYFIVNGAYRVLRML
STNRRNYPIAITRDAWKKRGAGFTDKGLLMRCVQEDQFSSVNELHYLTTGGAKLSFLLGK
QLYVIPLIMCLKALMDLTDHQIYLHLIRGRETDKYFSEKIKSMMCELQKEGLYTQDMCRE
YIGKSFREKLLGIVPAWYSDVQIYDYLFTHCVLIHCKSNIEKFDTLCLMARKLYSFISGE
SKEESVDTLSMQEVTLGGHTCLQLLKEKLTALLNSIKLQLKMQNKKIGPNWILEGKDVKR
ASMKGRNIGPLFKAFIATGTLPSKTGYGRMQTTGLTVIMEHLNRMRDLSHLRAIHRGAYF
MGTKTIQPRRLTGEAWGFICPVHTPDGAPCGLLNHLAQNCIVLNHTPKSPSALGLALTKL
GMTPIHSSPLAPYAECLEVVKDGCLIGYIRRDESEEFAQKLRIMKTQEEIFKYTEIVLIP
KRMYGGQYPGXFLVTSVGRMMRPVINLQTYTIEYIGTLEQLYLNVAVTPEYIEQGVHTHL
GVDKTSIFSNVGKFVPFSDCNPNPRNMYQCQMGKQAMGTPFHNWRSQTTGKVYRLQYPQV
PLVRNSHYDDMNMEDFCMGFNAVVAIVSYTGYDMEDAMVLNKCSMERGLGHGQIYKTEFV
DLTLLQERLKVNPNEVIHVFRRNPDILQQKLFLDSNGLPYPGTQLTDGDPYYCVYDLRQR
SFNVTIYKGEDCVVDKYSIMAATLNTGECQRVSITLRIKRNPSIGDKFASRSGQKGIMSR
LYPAEDLPFSERGIIPDIIFNPHGIPSRMTAGKLLELVAGKSAAEFGKSFDSTPFEFSDE
NPAVDYFGKILEKGGFNYYGEDVLYSGIDGRMLEVEIFEGIIYYQRLRHMTADKWQVRAT
GAVDLVTRQPVKGRKRGGAIRFGEMERDCLISHGAAYTLKDRLLDCSDISVEWVCEKCGG
ILSPSVSLSGGTRFYGKKQPACVLCGPDASVRQLHLPYSFKYLVAELASVGIKTNLGLHS
ADDIISEPSLSPYS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgatcactagtaagaagaccgtagaactctctctcaggcacctcaaagatcaaaatttc
ggcaagatcccggaagtccaaaatgaggctattcaggccctggctgctcctcatgttgag
tcatttaacttcttcctggaggaaggtctccaggctcttctctcaacccttcctgcatta
gaatttgaaatgctgagtggaagcagaatttccctgatggtgaccgatattacggttgga
aagcccaggctaccacctggagttgcagaagtctcaaacctcgatatttaccctaaagaa
tgtgttgaacgtggtggctcatacactgcaccagccagcgcagtgatagagtggacttgt
gataacgaagaagtgttatcgttcagacagtcactgggagacttacctattatgatcaaa
tccaagaactgtaatctgcacaacctgactccagaggagctagtcaagcatggtgagcta
gtcaacgagactggtggctacttcatcgtcaatggtgcttatcgagttctaagaatgtta
tcaacaaaccgtagaaactatcctattgccataaccagagacgcttggaaaaagagaggt
gcaggtttcacagacaagggcctcttaatgcgatgtgtgcaggaagatcagttctcttca
gtgaatgagcttcactacttgacaacaggaggagccaagctctcatttcttttgggaaaa
cagctctatgtaataccacttatcatgtgtctaaaggccttaatggatttaactgaccat
cagatttatcttcaccttatcaggggccgtgagactgacaaatatttttccgaaaaaatc
aagagcatgatgtgtgagctacagaaagaaggactgtatacacaagatatgtgtagagaa
tacattggaaaatcctttcgtgagaaacttcttggtattgtaccggcttggtatagcgat
gtacaaatatacgattacctttttacgcactgtgtgttgattcattgcaagtccaacatt
gagaagtttgatacactttgcttgatggccagaaaactctactccttcatcagtggagag
agcaaggaagagtctgtggatacattaagtatgcaggaggtcactcttggaggtcacact
tgcctacaattgttgaaagagaaactgacagctctactaaattctattaaattgcagttg
aaaatgcagaacaaaaaaataggcccaaactggatattagaaggcaaggatgtcaaaaga
gcttccatgaaaggcagaaacattggcccactgttcaaagccttcatagctactggaaca
ctgccatcaaagacaggatatggacgtatgcagaccacaggtttgactgtgataatggaa
catctaaacagaatgagagacttgtctcatctccgtgcaatacatcgaggtgcctacttc
atggggacgaaaacaattcagcctcgcagattgactggagaggcatggggcttcatctgc
ccagtgcatacacctgatggggcaccgtgtggcctactgaatcacttggcacaaaactgc
atagttctcaatcatactcctaagagcccttcagctttaggcctagcactgactaaactt
ggaatgacaccaattcatagctctcctttagctccatatgctgagtgcttagaagtggtt
aaagatggctgtttgattggctatatcagaagagatgaatctgaggaatttgcacagaaa
cttagaataatgaaaactcaagaagagatctttaagtatactgaaatagtactcatacca
aagcggatgtatggagggcagtatccaggtntttttttggtgacatctgtaggaagaatg
atgcggccagtgatcaaccttcagacgtacaccattgagtatattggcacactagagcag
ctctatcttaatgtggctgttactcctgaatatattgagcaaggggttcatacacacctt
ggagtagacaagacatctatattcagcaatgttggcaaatttgtaccattttctgactgc
aaccccaatcctcgaaacatgtatcagtgtcagatgggtaaacaagcaatgggaacccca
ttccacaactggagaagtcaaactactgggaaagtatatcgactacagtatccacaggtg
cccttggtcagaaactcacactatgatgacatgaacatggaagatttctgtatgggcttc
aatgctgttgttgccatagtttcatacactggatatgatatggaagatgcaatggttctg
aataaatgttcaatggagcgtggcctgggacacggtcagatatacaagacagagtttgta
gacttgaccttgcttcaggaaaggctcaaagtaaatcctaatgaggttattcatgtattc
agaagaaatccagacatacttcaacagaaattgtttttagacagtaatggacttccttac
ccaggaacacagctcactgatggtgatccatattattgtgtgtacgatcttcgccaaaga
agctttaatgtcacaatatacaaaggtgaagactgtgttgtggataaatactccatcatg
gctgccactctcaatactggggagtgtcaacgagtcagcataacattaagaatcaagaga
aatcccagtataggagacaagtttgccagccgtagtggtcagaaaggcattatgagtcgc
ttgtatcctgctgaagatcttcctttttctgaacgaggcataataccagacatcatcttc
aaccctcatggtattccttcccgtatgactgcagggaagctgttagagcttgttgctggc
aagtcagcagcggagtttggtaaatcatttgactcaacaccatttgagttttctgacgaa
aaccctgctgttgattactttggaaaaatattggagaaaggtggcttcaattactatggt
gaagatgtcttgtatagtggtatagatggccggatgctggaagtggaaatatttgaaggc
attatttactaccaacgtttgcgacacatgacagccgataaatggcaggttcgagccact
ggtgctgttgacttagtaactcggcagccagtgaaaggtcgtaaaagaggaggggcaatc
aggtttggagagatggagagggattgtctcatctctcatggtgccgcctataccttgaag
gatcgtcttctagattgttctgacatctctgtggaatgggtgtgtgagaagtgtggtggg
atactgtctccatcagtgagtttgtcgggaggaactcgcttctatgggaagaagcagcca
gcatgtgtgttgtgtggacctgatgccagtgttcgccagctgcacctgccttactccttc
aagtatctggtggctgagctggcaagtgtgggtatcaagaccaacctgggactccactct
gctgatgacatcatctcagaacccagcctaagcccttattcttaa
DBGET
integrated database retrieval system
