KEGG   Chenopodium quinoa (quinoa): 110702366
Entry
110702366         CDS       T05764                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110702366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqi03021]
    110702366
Enzymes [BR:cqi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110702366
Transcription machinery [BR:cqi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110702366
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 110702366
NCBI-ProteinID: XP_021735766
LinkDB
Position
Unknown
AA seq 1206 aa
MGLEGKDGLGTSSNGKDVFDDIDLETWDDEDMYSDDDADVMDMSLHDLGEASLMNFCKKA
SSSFFKQHGLISHQINSYNSFVREGIKRVFDNIGEITVNPGYDPSKKGEGGWRYASVRFG
NVELERPMFWTGEKFHADGGKDFIKLLPRHARLQNMTYSARLKVETHLQIYTQEKVKSDK
FKTGKSEYIDRTIVKDETTDVIVGRIPVMVKSDICWMSQAEKGDCEFDHGGYFIVKGAEK
TFIAQEQICLKRLWISNEPFWKVAYRSEFKRRRVHVKLVENPKAENIQGGEKVISVYFSI
AEVPIWILFFALGVSSDKEVVELIDFSTDDGRISNILFASIHDADEKCDGFRRGGKALEH
IDHIIRESKFPPSESTAEFIETNLFPSLSGNKQKARFLGYMVKCLLQAFSGRRKCDNRDD
FRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGDRDLQAIEHYLDASIVTNGLTR
SFSTGAWAHPFKKTDRVSGVVANLRRTNPLQSTCDMRKTRQQVSYTGKVGDARYPHPSHW
GKICFLSTPDGENCGLVKNIAATGLVSCSISKNDLSDNLVRCGMEKLVSDTCTSLSGKDK
VFVDGEWEGVCADSLSFVQELRRKRRKNRISSQVEIKRDVQNSEVRIFCDAGRILRPLLV
VDNLKKTKLLKGDEFSFETLLEKGIIELIGTEEEEDCRTAWGIKFLFEDKGKDPVKYTHC
ELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTNPNIRVDTLSHQMYYPQ
RPLFRSVISDCLGKPGYPLGRNQILPKAEFFNGQNGIVAVNVHLGYNQEDSLVMNRASLE
RGMFRTEHTRSYKAEVDNQESSEKRRKFDDTVSFGKIQSKIGRVDNLDDDGFPYIGANLQ
SGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFS
SMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSL
KYATPFSTLSVESITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQRLIHMSED
KVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMH
VCRKCKNIANVIQRTVPGGKKIRGPYCRFCESVDEIVKVNVPYGAKLLCQELFSMGISLR
FETQLC
NT seq 3621 nt   +upstreamnt  +downstreamnt
atggggcttgagggaaaagatggcctgggcaccagtagtaacggtaaagatgtttttgat
gatattgatctggagacctgggatgatgaggatatgtattcggatgacgatgctgatgtt
atggacatgagcttgcatgaccttggtgaggcttcattgatgaacttctgcaagaaagca
tcgtcatctttcttcaagcagcacggtctcatcagtcatcagattaactcctacaacagt
tttgtccgtgaaggtataaagagagtttttgataacattggtgagataactgtgaatcca
ggctatgatccctcgaagaagggtgagggtggatggagatatgcttcggtaagatttggg
aatgtggagcttgagcgtcctatgttttggactggagagaagtttcatgcagatggtggg
aaagacttcattaagttgcttccccgacatgcccggcttcagaacatgacttactctgca
agattgaaagttgagactcaccttcagatatatacccaagagaaggtcaaaagtgacaag
tttaaaactggtaagtcagagtatatagacagaactatcgtgaaagatgaaacaacggat
gtcatcgttggaaggatccctgtgatggtgaagtctgatatatgctggatgagtcaagct
gagaaaggtgattgtgaatttgatcatggaggctattttatagtcaagggtgctgagaag
acatttattgctcaagaacagatctgcttgaagaggctttggatttctaatgaacccttt
tggaaggttgcttatcgatctgagttcaagaggagaagggtacatgtcaaattagtagag
aatccaaaagctgaaaacatccaaggaggagaaaaagttatcagtgtgtacttttctatt
gcagaagtccctatttggatacttttttttgcccttggtgtatcatctgacaaggaggtg
gtggaattaattgatttcagcacggatgatggccgcatcagtaacatcctctttgcatcc
attcacgatgctgatgagaaatgtgatggatttcgtcgtggtggcaaagctttggagcat
attgaccatataataagagaatctaaattccctccctctgagtccactgcagaatttatc
gaaacaaaccttttccctagcctttctgggaacaagcaaaaagcccgctttcttggatat
atggttaagtgtcttttgcaagcattttcaggcaggagaaagtgtgataatagagatgac
tttagaaataagcgacttgagtgtgcttctgagcttctagagagggaacttagggtccat
atgaggcatgctgagaagcgaatggtgaaggcaatgcagcgggacctttatggggatcgt
gatctgcaggctatcgagcactacttggatgcatcaatcgtcaccaatggtcttaccaga
tcattttccactggtgcatgggcgcatcctttcaagaaaacagacagggtttctggtgtg
gttgcaaacctcaggcgaactaatccgttgcagagtacttgtgatatgaggaaaactcgt
cagcaggtttcatacacagggaaggttggagatgccagatacccacacccttctcactgg
ggaaaaatatgcttcttgtctacaccggatggggagaactgtggtcttgtgaagaacata
gctgctactggacttgtcagttgcagtattagtaagaatgacctgtctgataatttggtg
aggtgtgggatggaaaaattagtgagcgacacttgtacttcgctgagtggaaaagacaag
gtttttgtggatggcgagtgggaaggagtatgtgctgattccctctcctttgttcaggag
ttgagaagaaagcgtcggaagaatcgcatttcaagccaggttgaaatcaaacgtgatgtt
caaaattctgaagtgcgaatattctgtgatgctggaagaatacttcgacctcttttagta
gttgataatttaaaaaagacaaagttattgaaaggggatgagttttcttttgagaccctt
ctagaaaaaggaataatagaattgattgggactgaagaggaagaagattgtcgcactgca
tggggaattaagttcctttttgaagacaagggaaaagaccctgtcaaatacactcattgt
gagcttgacatgtcatttttgttgggagtcagttgtggtattatcccctttgcaaatcat
gatcatgctaggagggttctttaccaatctgagaagcattctggacaagccataggatat
tccagcactaaccccaatattagagtagataccttgtcccaccaaatgtactaccctcaa
agacctctcttccgttcggtgatttctgattgtcttggaaagccaggatatccattaggc
cgcaaccagatacttccaaaggcagaattttttaatggtcaaaatggtattgttgccgta
aatgtccatcttggttataaccaagaagattctttggtcatgaatcgagcttccctggaa
cgaggcatgtttaggactgagcacaccaggagttacaaggctgaagttgacaaccaggaa
tcatcagaaaagaggaggaagtttgacgatactgttagttttgggaagatacagagcaaa
ataggacgggttgacaaccttgatgacgatggatttccatacattggagcaaacttgcag
agtggagatattatcatcggcagatgtgcggaatctggggctgatcatagtgtcaagcta
aagcatacagaaagaggcatggtgcagaaagttgtcctgtcagcaaatgatgatgggaag
aattttgcagttgtatcacttagacaggtccgttcaccttgtcttggtgataagttttcg
tccatgcacggtcaaaagggtgttcttggatatcttgagtcacaggagaattttcctttc
acaaaacaggggatagtgcccgatatagtaatcaatcctcatgcatttccctctagacaa
actcctggccaactactggaggctgcccttgggaagggcattgcatgtggtggctcattg
aaatatgccaccccattctctactctctctgtcgaatccataacagagcagcttcacagg
gctggattctcaaggtgggggaatgaaagggtctataatggaagaacaggagagatgatc
cgtaccctcatattcatggggcccactttctatcagcgtctgatccatatgtctgaagac
aaagtcaagtttcgaaatacaggtcccgtccatccactgacccggcagccggtggcagac
aggaaacgattcgggggtatcaagtttggggaaatggaacgggattgtctgatcgcccat
ggtgcttcagccaacctgcatgagcgactcttcactctaagtgactcgtcccagatgcat
gtttgcaggaagtgcaagaacattgcaaatgtgatccaaaggacagtcccaggtggcaaa
aagattcgagggccttactgcaggttctgcgaatctgttgatgaaatcgtgaaggtgaat
gtgccatatggggccaagctgttgtgtcaagagctgttcagcatgggtatttcgcttcgt
tttgagacccagctctgttga

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