Chenopodium quinoa (quinoa): 110704662
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Entry
110704662 CDS
T05764
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110704662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110704662
Enzymes [BR:
cqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110704662
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110704662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110704662
NCBI-ProteinID:
XP_021738172
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MNQTSESASETVAAVHFGVMTDEEIRKLSVVKITNRNILNLVGRPEPGGLCDPALGPSDD
HSLCKTCGHRAFYCPGHCGHIDLVSLVYHPLLFDMLYRMLQNTCLACYHFKAPPEEVEMC
ICKLNLITKGDIVGARELDSNSSGYPDDSYKSLGGIFEGLKHRNLTSFQLTEALSVLKSL
LKKRSPKCNHCGAKNPPITKPTFGWFHMGGLNDSNIKANIIKGHRLDGPLAEGDDDNALS
EVENAEDHDDGKLASHKQRKKKDDLHLEFMKWKKSRSLLPTEVRGILERLWENEARFCSF
VCDIQQHQGFTSEKKAAFMMFFLKTLLVPPLKFRPPSKGGELVMEHPRTVLLSKVLESNI
SLANAYEQHAEHNFILSRWMNLQQSINVLFNSKSAARPGQRELASGICQSLEKKEGLFRQ
KMMGKRVNFACRSVISPDPYLAVNEIGIPPVFALKLTYPERVTPWNVTSLREAIVNGPDI
HPGATHYVDKVTSKLPPIRKSRIAFARKLPSSRGVTTQPGKSFSNDYEGKVVHRHLRNGD
VVLVNRQPTLHKPSIIALKVRVLPGEKTIRFHYANCDSFNADFDGDEINVHFPQDEISRA
EAYNIVNADNQYIVPTRGDPKRALIQDHIVGAVLLTKRDTFLTLQEFNELLYMSGVCSSG
ASSLNAKSGKKISVVDAENVIQVHPPAIIKPQMLWTGKQVITAILNHVTRGSLPFTAKKR
AKIAREYFGRDESKRKNDENLKTAEEGSQKKKKKSRTSKKMIAGDSAISIQRDPSHSIDE
DVVFVYKNELVQGVIDKEQFGKFGLVHTVQEMYGSNAAGTLLSVLSRVLTAFLQLHGFTC
GVDDILLLQPYDILRKKLLDVCHNCGEEVHQQFIGREKEGLEFSEMQIEIEKAVRRNGES
AIALLDGLMRSKLNTLSSAVTKLFPEGLIKPFRKNCLSLMTLSGAKGGTFNFQQISLLLG
QQELEGKRVPRMVSGKTLPCFVPWDCSARAGGFISDRYLTGLRPQEFYFHCMAGREGLVD
TAVKTSRSGYLQRCLIKNLECLSVQYDYTVRDADGSVIQFRYGEDGIDVHKKNYMHEYEA
LALNQSLIVSTNPLSQIDDGSLSKYIDEDNEVPNQLAKEAKEFYKGHPKDRLNFLKLVKN
KYYMSLAQPGEPVGIIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASKS
IRTPTMTCPLLKCKAKDDAEQLAAMLKRITVADLIENMEVSVVPFAIEKLEICSIYKLKI
KLYDPVLYPPHTDITLKDCHSTLVDEYMSEMEVAIKSHLLLLSRICGIKSEAQPKGSTDM
DEDGFRSQSQTEEDDDDNEDDDDDNDCNEVGGDHSSKVRKRKQQDEIDYEDDSEEVEEGN
PVADRENGDEDGDEDEDGEVFEENDVLKTSSGPDSEEQKDKPEASQRKKSDNDKAIYVDC
DGLFFEVHFKLSNEPHILLAQIAEKVAKKVYVKTAGKIEQCKVVELHLDDSGKGGIPMLR
KGKESRPALQTAGVDFAAFWDMQDELDVKLISSNDIYAMLSTYGVEAARATIITEIFTVF
GHYGVTVDMRHLTLIADYMTYTGAYRPLSRSGGIIDSISPFSKMSYETASKFLTDAAAHG
EVDTLETPSARICLGLPAKVGTGCFDLMHDLDV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacatccgagtcggcgtcggagacggtggcggcggtgcatttcggtgttatg
acggatgaagagatacggaagcttagcgtagtcaaaattacgaaccgtaatatattgaat
ttggttggtcgacccgagccgggtggtctgtgtgatcctgctttaggtccatcggatgat
catagtctctgcaaaacttgtggtcatcgtgccttctattgccctggacattgtggtcat
atagatctcgtgtcattggtttatcaccctttattgtttgatatgctctacagaatgctg
cagaatacctgtttggcttgctaccattttaaggcacctccagaggaggttgagatgtgc
atctgtaaattgaaccttataacaaagggtgatattgttggggccagagagctagattct
aattcaagtgggtatcctgatgacagctataaaagccttggtgggatttttgagggcctt
aagcatcgtaacttgacttcttttcagcttaccgaagcactttcagtcttgaaaagttta
ttgaagaaacgaagtcccaaatgtaatcattgtggtgccaagaatcctcccattactaag
cctacatttggttggtttcacatgggtggcttgaatgatagcaacataaaagcaaatatc
atcaaagggcataggttggatggacctttggctgaaggagatgatgataatgctttatct
gaggtagaaaatgctgaggatcatgatgatggaaaattagcatcgcataagcaaaggaaa
aaaaaagatgacctgcacctagaatttatgaagtggaaaaaatcacgatctcttttacca
acagaagttagaggaatattagagcgtctttgggaaaatgaggctcgattttgctcgttt
gtttgtgatattcagcaacatcaaggatttacatctgagaagaaagctgcttttatgatg
tttttcttaaaaactcttctagtacctccattgaagtttcgtccgccttctaagggaggg
gaattagtgatggagcatcctcggacagttttattgagcaaggttttggagtctaatata
tccttggcaaatgcttatgagcagcatgctgaacataactttattcttagtaggtggatg
aatcttcaacaatctataaatgttcttttcaatagcaagagtgcagcacgtcctggacaa
agagaattggcttctgggatatgtcaatcgctggaaaaaaaggagggcttgttccggcag
aagatgatggggaaacgagttaattttgcttgtcgttctgttatatcacctgatccatat
ctagcagtcaatgaaattggcattcccccggtttttgcattgaagttgacctaccctgag
agagtgactccatggaatgtgacaagcttaagagaagcaattgttaatggacctgatatt
catcctggggccacgcactatgttgataaagtaacatcgaaattaccacctatcaggaaa
tctcgtattgcttttgcaagaaaattaccttcttcaagaggagtcacaacccaacctggg
aagtctttcagtaatgattacgaagggaaggttgtacaccgtcacttgcgcaacggggac
gtagttctggtgaatcgacagccgacgcttcataaaccaagtataattgcacttaaggtc
cgagtcctgcctggagagaagactattcgttttcattatgcaaactgcgattctttcaat
gctgattttgacggtgatgaaataaacgttcactttccacaagatgagatatctcgggct
gaagcttacaacattgtcaatgctgataaccaatatatagttcctactcgtggtgatcct
aaaagagccttaattcaggatcacattgtaggtgctgtacttctcacaaagagagatact
tttcttaccttacaagaattcaatgaacttctatatatgtccggtgtgtgttcttctggc
gcatcatccctaaatgccaaatctggaaagaaaatatctgtagtagatgcagaaaacgtt
atacaggttcatccacctgctataattaaaccacagatgctttggacagggaagcaggtt
ataactgccatcttgaatcatgtaacgagaggttctttaccatttactgcaaaaaagcgt
gctaaaattgctcgagaatattttgggagggatgaatccaaaaggaagaatgatgaaaat
cttaagacagctgaagagggttctcaaaagaaaaagaagaaaagtcggacttctaagaag
atgattgctggagattcggcaataagcattcaaagggaccccagccatagcatcgatgaa
gatgttgtgttcgtttacaaaaatgagctggttcaaggggttattgacaaggaacagttt
gggaagtttggtttagttcatactgtgcaggagatgtacgggtctaatgctgcaggaacc
ttgctttctgtactgagtcgtgtattgacagctttcctgcagttgcatggttttacctgt
ggagttgatgatattctcctattacaaccttatgacatcctgaggaaaaaattgcttgat
gtttgccataattgtggcgaggaggttcaccagcaatttattggccgcgagaaagaaggt
ttagaattttcagagatgcaaatcgaaattgaaaaagcagttcggcgtaatggagaatct
gcaatagcgcttcttgatgggttgatgagaagtaagcttaatacactgagctctgcggtc
actaagctattccctgaaggactaattaagccttttcggaagaactgtctttctctcatg
acactctctggagctaaaggtggcactttcaacttccaacaaatctctcttttgttgggt
caacaagagttggaagggaaacgtgtgcctcgaatggtttctggaaagacgctaccttgc
tttgtcccttgggactgttcagctcgagctggaggatttatcagtgatcgttatcttact
ggtcttcgcccccaagaattttatttccactgcatggctggtcgtgaagggttagtggat
acagccgtcaaaacatctcgcagcggataccttcaaaggtgcttgattaaaaatcttgag
tgcctcagcgttcaatacgactacacagttcgtgatgcagatggttctgtcattcagttc
cgctatggagaagatggaatcgatgttcacaagaagaactatatgcatgaatatgaagca
ttagcattgaatcaatcgctgattgttagcacaaatcctttaagtcaaatcgatgatgga
tccttatccaagtacattgatgaagataatgaagtaccaaatcaacttgccaaggaagcc
aaagaattctataaaggtcacccaaaggaccgtttgaactttctaaaattggttaagaac
aaatattacatgagtcttgcacaacctggggagcctgttggaataattgcagctcagtca
gttggagaaccatctacacagatgacattgaatacattccatcatgccggtcgaggtgaa
atgaatgtgacactgggaattccacgtctgcaggagatattaatgactgcatcaaaatct
attaggactccaactatgacgtgtcctttgcttaagtgcaaagctaaggatgatgcagag
caacttgctgcgatgttgaagaggatcacagttgctgacttgatagaaaacatggaagtt
agcgttgtgccatttgcaattgagaaacttgaaatctgcagtatatataagcttaaaata
aagctctatgatcctgtactttatccccctcacactgatataacattaaaagactgtcac
agtaccctggtagacgagtatatgagtgagatggaagttgctataaaaagtcatttgctt
ttgctttctagaatatgtggtatcaaatctgaagcccagccaaaaggttcaacagatatg
gatgaagatggctttaggagccagtcacagacagaagaagatgatgatgataatgaagat
gatgatgatgacaatgattgcaatgaagtggggggagatcattcgtcaaaggtacgaaaa
aggaaacagcaagatgagattgactatgaggatgactcagaagaagttgaggaggggaat
cctgtagctgatcgggagaatggagatgaagatggagatgaggatgaagatggagaagta
tttgaggagaatgatgtactgaaaacctcttctggccctgattctgaagaacaaaaggac
aaaccagaagctagtcaaagaaaaaaatcagataatgacaaagcaatatatgttgactgt
gacggactattttttgaagtccattttaagttgtcaaatgaaccacacatattgctggcg
cagattgcggagaaggtagctaagaaagtttatgttaagactgctggcaagattgagcaa
tgtaaagtagtggagcttcatttggacgactctgggaagggaggaatcccaatgcttaga
aaaggtaaagaatctcgtcctgctcttcagactgctggtgtggattttgccgctttttgg
gatatgcaagatgagctagatgtcaagctcattagttccaatgacatttatgcgatgctt
agtacttatggggttgaagctgccagagcgaccattataacagagatcttcacagttttt
ggtcactatggagtcacagtagacatgagacacttaaccttaattgctgattacatgaca
tatacgggcgcgtataggccattgagcagaagtgggggtataattgattcgatatctccg
tttagcaagatgtcttatgaaactgcttccaagttccttactgatgcagcagcccatggt
gaagttgataccttggagactccttcggctaggatttgtctcggcttgcctgctaaagtt
ggtacaggatgtttcgacttgatgcacgatttggatgtgtaa
DBGET
integrated database retrieval system
