KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ001219
Entry
CpipJ_CPIJ001219  CDS       T01079                                 
Name
(GenBank) DNA-directed RNA polymerase II 19 kDa polypeptide
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020  RNA polymerase
cqu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CpipJ_CPIJ001219
  09124 Replication and repair
   03420 Nucleotide excision repair
    CpipJ_CPIJ001219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ001219
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ001219
   03400 DNA repair and recombination proteins [BR:cqu03400]
    CpipJ_CPIJ001219
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CpipJ_CPIJ001219
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CpipJ_CPIJ001219
DNA repair and recombination proteins [BR:cqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CpipJ_CPIJ001219
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-ProteinID: EDS28731
VectorBase: CPIJ001219
UniProt: B0W2B6
LinkDB
AA seq 173 aa
MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGVIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC
PNGNPPCYKSKDEDVVIALEDKIRLKIVGTRVDATGIFAIGTLMDDYLGLACS
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttctaccacatatctctggaacacgaaatcctgcttcacccgcgctacttcggtccg
cagttgatcgaaaccgtcaagcagaagctgtacaccgaggtcgagggcacctgcacgggc
aagtacgggttcgtgatagcggtcaccacgatcgacgacatcggttccggtgtgattcag
ccgggccagggcttcgtggtgtacccggtcaagtacaaggccatcgtgttccggccgttc
aagggcgaggtgctggacgcggtcgtgacccaggtcaacaaggtgggcatgtttgcggag
attggcccgctgtcgtgcttcatttcgcaccactcgattccggcggacatgcagttctgc
ccgaacgggaacccgccgtgctacaagtccaaggacgaggacgtggtgattgcgctcgag
gacaagatccggctgaagatcgtcggtaccagggtggacgccacgggaatttttgcgatc
ggaacacttatggacgattatctcggattggcttgtagttga

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