KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ001855
Entry
CpipJ_CPIJ001855  CDS       T01079                                 
Name
(GenBank) DNA-directed RNA polymerase II 15.1 kDa polypeptide
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020  RNA polymerase
cqu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CpipJ_CPIJ001855
  09124 Replication and repair
   03420 Nucleotide excision repair
    CpipJ_CPIJ001855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ001855
   03400 DNA repair and recombination proteins [BR:cqu03400]
    CpipJ_CPIJ001855
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CpipJ_CPIJ001855
DNA repair and recombination proteins [BR:cqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CpipJ_CPIJ001855
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR CpXC
Other DBs
NCBI-ProteinID: EDS33843
VectorBase: CPIJ001855
UniProt: B0W4J8
LinkDB
AA seq 127 aa
MSYDAPHDDGPGFVGIRFCQECNNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKI
MHEIDELTHIVPDVISDPTLPRTEEHACPKCAHREAVFFQAQTRRAEEEMRLYYVCTNPN
CCHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcgtacgacgcacctcacgacgatggcccaggatttgtcggtattcgtttctgccag
gaatgcaacaacatgctttacccgaaggaggacaaagaaaataaggtcctgctgtacgcg
tgccggaactgcgactacaaacaggaagcggactccaactgcatttacgtgaacaaaatt
atgcacgaaattgacgagctgacccacatcgtgccggacgtgatatcggatccgacgttg
ccgcgaaccgaggagcacgcctgtcccaagtgtgcccaccgggaggcggtcttcttccag
gcgcagacccggcgagccgaagaggagatgagactgtactacgtgtgcacgaatccgaac
tgctgccaccgctggaccgagtag

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