KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ002930
Entry
CpipJ_CPIJ002930  CDS       T01079                                 
Name
(GenBank) RNA polymerase small Zn-binding subunit
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020  RNA polymerase
cqu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CpipJ_CPIJ002930
  09124 Replication and repair
   03420 Nucleotide excision repair
    CpipJ_CPIJ002930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ002930
   03400 DNA repair and recombination proteins [BR:cqu03400]
    CpipJ_CPIJ002930
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CpipJ_CPIJ002930
  RNA polymerase III system
   RNA polymerase III
     CpipJ_CPIJ002930
  RNA polymerase I system
   RNA polymerase I
     CpipJ_CPIJ002930
DNA repair and recombination proteins [BR:cqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CpipJ_CPIJ002930
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon DUF5816 MCM_OB zinc_ribbon_13 DUF6083 YjdM_Zn_Ribbon HypA Cytochrome_C7 DZR zf-H2C2_2
Other DBs
NCBI-ProteinID: EDS37669
VectorBase: CPIJ002930
UniProt: B0W764
LinkDB
AA seq 58 aa
MSDPSSKDTVLKTAMIYVCGECHHENEMRPRDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atgtcggaccccagctccaaggacacggtgctgaaaaccgcaatgatttacgtttgcggc
gaatgccaccacgagaacgagatgcgaccccgggatccgatccgttgccgagaatgtggc
taccgcatcatgtacaagaagcgaacaaagcgattggttgtcttcgatgctcgttaa

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