Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006171
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Entry
CpipJ_CPIJ006171 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CpipJ_CPIJ006171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ006171
Enzymes [BR:
cqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CpipJ_CPIJ006171
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CpipJ_CPIJ006171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
EDS26516
VectorBase:
CPIJ006171
UniProt:
B0WFY1
LinkDB
All DBs
AA seq
1303 aa
AA seq
DB search
MPKEQFREADVIKKISHVSFGIDSAELIQQESHLHVVAKNLYNQDANRTPVSYGVLDRRM
GVSQKDATCDTCKKGLNDCVGHFGYINLALPVFHVGHFRATITILQSICKICSRVMLKED
EKKQFSARLTNPNLSYLAKKSIHSQVLKKAKKNTKCPCCGCLNGPVKKGAGLMKIVHEPF
RGKKATDPLVTSALDEMLGAIEGNRELSQTVGPSSLIKELNPLEVLDLFKNIPKSDIPLL
GMTSPESNPADLIVTRVFVPPVCIRPSVVSEVKAGTTEDDLTMKQSEILLISDVITKHMM
SGGKIELIQEDWDYLQLHCALYFNSELSGIPLSLMPKKPTRGIVQRLKGKQGRFRGNLSG
KRVDFSARTVISPDPNLMIHQVGVPDRVAKILTFPERVNTANINRMRQLIKNGTEKHPGA
NYVQQKGSAFKKYLAYGNRDKVAQDLKCGDIVERHLMDGDVVLFNRQPSLHKLSIMCHVA
KVQPQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELL
IAATQDFITGGYLLTQKDQFLTREQVMQLAACMLSGPDANMEIDLPKPAIIKPRKLWTGK
QIFSLILKPNRHSVVNANLSTKGRNYTTGKDIRKLLEEKQKLLENGYSRCDEYIAEMKKG
TLQCQPGCTAEQTLEAVMLKELSSIRELAAKACFRELHPTNSALIMAQSGSKGSNINISQ
MIACVGQQAINGKRVPNGFEDRALPHFEKFSKIPAARGFVQNSFYSGLTPTEFFFHTMAG
REGLVDTAVKTAETGYLQRRLVKCLEDLVVQYDGTVRNAIGEVVEFTYGADGLDPVFMEV
KNKPVDIERQFMHVRNMFPCRDEAPLRGAEILETGDKILQTAEFDGCRADFRKECLEFLK
KFGERLHSVQSRYNTDAKVSLEVERTTPGQLKKFLMQVRDKYNKAITEPGTAVGALAAQS
IGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKAISTPIITAEIADNTSMEFARK
VKARIEKTTLGEISSYIEEVYKSDDCFLLIKLDLDRIRVLGLEVNAETIRYSICTSKLKL
KQENVEVYGPSLIIIRPDPTKHSHALNAELQRLLSAIPNVVVAGLPQVSRAVIAVDDAHG
PPTYKLCVEGYGLRDVMATYGVVGARTKSNNILEVYVTLGIEAARTTIMNEITDVMEGHG
MSVDHRHIMLLASQMTSRGEVLGITRHGLAKMRESVFNLASFEKTADHLFDAAYYGQTDS
IDGVSERIILGMPAAIGTGLFKLIHNHTETKLDEMVEPIFNTT
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagagcagttccgcgaagcggatgtcatcaaaaagatctcgcacgtttcgttc
ggcatcgatagtgccgagctgatccagcaggagtcccatctgcacgttgtcgcgaagaac
ctgtacaaccaggatgcgaaccggacgccggtgtcgtacggcgtgctggaccggcggatg
ggcgtcagccagaaggacgcaacgtgcgacacctgcaagaagggcctcaacgactgcgtg
ggccacttcgggtacatcaatctggcgctgccggttttccacgtcggccacttccgcgcg
acgatcacgattctgcagtcgatctgtaagatttgctcgcgcgtgatgctgaaggaggac
gagaagaagcagtttagcgcccggttgacgaacccgaatctgtcgtacctggcgaagaag
tcgatccacagtcaggtgctgaagaaggcgaagaagaacacgaaatgtccgtgctgtggc
tgcttgaacggtccggttaagaagggagccggattgatgaagatcgtacacgagccgttc
cgcggaaagaaggccaccgatccgctggtcacgagtgcgctcgatgagatgctcggagca
attgaaggcaaccgagaactttcgcaaactgttggtccgtcctcgctgattaaagagctg
aatccgctcgaggtgttggatctgttcaagaacattcccaaaagtgacattccgctgctg
ggaatgacctcgcccgagtctaatccggcggatttgattgttaccagagtgtttgttcca
ccggtttgcatccgtccgtcggtggtttccgaggtgaaggccggtacgaccgaagatgat
cttacgatgaagcagagtgaaatcctcctgattagcgacgtcattacgaagcacatgatg
tccggaggcaagattgaactgatccaggaggattgggactacctgcagttgcactgcgcg
ctgtacttcaacagcgaactgtccggaatcccgctgtcgttgatgcccaaaaagcccaca
agaggaatcgtccaacgactaaagggaaaacaaggtcgcttccgtggcaacctctccggc
aagcgtgtggacttttccgctcgtaccgtaatatcccccgatcccaatcttatgattcat
caggtcggagtcccggatcgtgttgccaaaatcctaaccttcccagagcgcgtcaatacc
gcaaacatcaacagaatgcgccaactgatcaagaacggcacggaaaagcatcccggcgcg
aactacgttcagcaaaagggcagcgccttcaagaaatatcttgcctacggcaatcgtgac
aaagtcgcgcaagatctcaagtgcggagacatcgtggaacgtcacctaatggacggcgac
gtggtgctcttcaatcggcagcccagcttacacaagctcagtatcatgtgtcacgtggcg
aaagttcaaccccagaggacgttccgcttcaacgagtgcgcgtgcaccccatacaacgcc
gatttcgacggggacgaaatgaacctgcacttgccccagacggaggaagctcgtgccgaa
gcgctggtcctaatggggaacaaatccaacctcgtaacgccgcgtaacggagagttgctg
attgcggccacgcaagatttcatcaccggaggatatttactcacgcaaaaggaccagttc
ctcacgcgcgaacaagtgatgcaacttgcggcgtgcatgctgtccggcccggatgccaac
atggagatcgacttgcccaaaccagccatcatcaaaccgcgcaaactctggacgggcaag
caaatcttcagcctgatcctcaaacccaaccgacacagcgtcgtaaacgccaacctatcc
accaaaggtcgaaactacaccaccggcaaggacatccgaaaactgctcgaagaaaagcag
aaactcctcgaaaacggttacagccgttgtgacgagtacatcgcagaaatgaagaaggga
acgctccagtgtcaacccggttgcaccgcggaacaaacgctcgaagcggtcatgctgaag
gaactgtccagcattcgagagctggctgcgaaagcttgcttccgcgagttgcaccccaca
aacagcgccctcatcatggcacagtccggctcgaagggttcgaacatcaacatctcgcag
atgattgcctgcgtcggccagcaggccatcaacggcaagcgggtgccgaacgggttcgag
gatcgggcgctgccgcactttgagaagttctcgaaaatccccgccgcccgcggcttcgtc
cagaacagcttctactcggggctgacaccaacagagttcttcttccacacgatggccggt
cgcgagggtctggtcgatacggcggtcaagacggccgaaacgggctacctgcagcggcgg
ctggtcaagtgtttggaggatttggtggtgcagtacgacgggacggtgcggaacgccatc
ggtgaggtggtggagtttacgtatggggccgatgggttggatccggtgtttatggaggtg
aagaacaagccggtggacattgagcggcagtttatgcacgtgcggaacatgttcccgtgc
cgggatgaggcgccgctgaggggcgcggagattctggaaacgggggataagattttgcag
acggccgagtttgacgggtgccgggcggatttccggaaggagtgcttagagttcctgaag
aagtttggcgaacgactgcactccgttcagagtcgctataatacagatgcaaaggttagc
ttggaggtcgaacggaccacgccaggtcagttgaagaagttcttgatgcaggtgcgggac
aagtacaacaaggccattaccgagccgggaactgctgtgggagcgctggccgctcagagt
atcggcgagccgggcacgcagatgacactgaagacgttccattttgcgggtgtcgcttcg
atgaacatcacgcagggagtgccacgtattgtggagattatcaacgctacgaaggccatt
tcgacgccgattattacggcggagattgccgataatactagtatggagttcgcgcggaag
gtgaaggctaggatcgagaagacgacgctgggcgagatttcgtcgtacattgaggaagtg
tacaagtcggacgattgcttcctgctgatcaagcttgatctggacagaatccgggtgctc
gggctggaagtcaacgctgaaactataagatattcaatttgcacatcaaagctcaaactc
aagcaggaaaacgtagaagtgtacggcccctcgctcatcatcatccgtccggatccgacc
aagcacagccacgcgctgaacgccgagctgcagcgtttgctgtcggcgattccgaacgtg
gtcgtagccgggctgccgcaggtttcacgcgccgtcattgccgtggacgatgcgcacgga
ccgcccacgtacaagctgtgcgtcgaagggtatgggctgcgcgatgtaatggccacgtac
ggggtcgtcggagcgcgcaccaagagtaacaacatcctggaggtgtacgtaacgttgggc
attgaagcagctcggacgacgatcatgaacgaaattaccgacgtcatggaggggcacggc
atgagcgtcgatcatcggcacattatgttgctggccagtcagatgacatcgcgcggagag
gttctgggcatcacgcggcacgggttggccaagatgcgggagtcggtgttcaatttggct
tcgtttgagaaaacggccgaccacctgttcgacgcggcttactacggccagacggactcg
atcgacggcgtctcggagcggatcatcctgggcatgccggccgccatcggaaccggtctg
ttcaagctgatccacaaccacaccgaaaccaagctggacgaaatggtggagcccattttt
aacaccacgtga
DBGET
integrated database retrieval system
