Capsella rubella (pink shepherd's-purse): 17880557
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Entry
17880557 CDS
T02984
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03060
Protein export
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
17880557
04141 Protein processing in endoplasmic reticulum
17880557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crb03110
]
17880557
04131 Membrane trafficking [BR:
crb04131
]
17880557
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17880557
Enzymes [BR:
crb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
17880557
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP70 / DNAK
17880557
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
17880557
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17880557
Exosomal proteins of other body fluids (saliva and urine)
17880557
Exosomal proteins of colorectal cancer cells
17880557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
Hydantoinase_A
FtsA
Motif
Other DBs
NCBI-GeneID:
17880557
NCBI-ProteinID:
XP_006286341
UniProt:
R0GQS1
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MARSFGANGTVVLAIIFFGCLFAFSTAKEEATKLGSVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDRKL
VPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGKFDLNGXSPFDRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNALETYVYNMKNQVNDKDKLADKLEGDEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGAGGESPTEE
EDESHDEL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcacgctcgttcggagcaaacggcactgttgtgctggcgatcatcttcttcggatgt
ttatttgcgttttccactgccaaagaagaggccacgaagctgggatcagttatagggatt
gatcttggtacaacttactcttgtgttggtgtttacaagaatggtcacgttgaaattatt
gccaacgaccaaggaaaccgtattactccttcctgggttggttttactgactctgagagg
ctcattggtgaggctgctaagaatcaggcggctgttaaccctgagaggactatcttcgac
gtcaagagattgattgggcgaaaattcgaggacaaggaggtccaaaaggacaggaaactt
gtaccttaccagattgtgaacaaggatggtaagccatacattcaagtcaagatcaaggat
ggtgagactaaggttttcagtcctgaggagatcagtgctatgattctgactaagatgaag
gagacagccgaagcttaccttggaaagaaaatcaaggacgctgttgtcaccgttccagct
tatttcaacgatgcccaaaggcaggctacgaaggatgctggtgttattgctgggcttaat
gttgctagaatcatcaacgaacctactgctgctgctattgcctatggtctggataaaaag
ggtggtgagaagaacatccttgtctttgatcttggtggtggtacctttgatgtcagtgta
ttgaccattgataacggagtgtttgaggttctctcaacaaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggagtacttcatcaagttgatcaagaagaagcac
cagaaggacatcagcaaggacaacaaggctcttggtaagctccgaagggaatgtgaaagg
gcaaagagagctcttagtagccagcatcaagtccgtgtagagattgagtcactctttgat
ggtgttgatttctctgagccactcaccagagctcgtttcgaggagctgaacaatgacttg
ttcaggaagaccatgggacctgtgaagaaggccatggacgatgctggtctacagaagagc
cagatcgatgagattgtccttgttggtggaagcaccaggatcccaaaggttcagcaacta
ttgaaggacttctttgaaggtaaagagccaaacaagggtgtgaaccccgacgaggctgtt
gcttatggtgctgctgttcagggtggtattttgagcggagaaggcggtgatgagaccaaa
gatattcttcttcttgatgtggcaccactcactttgggtattgagactgtaggaggagtg
atgacaaagctgatcccaagaaacacggttattccaaccaagaaatctcaggttttcaca
acgtaccaagaccagcagacaactgtctcaatccaggtctttgaaggtgaaaggagtctc
accaaggactgcaggttgctcggaaaattcgacctcaacggnnattctccttttgacaga
ggaacccctcaaatcgaggtcacattcgaagtggacgccaacggtattcttaacgttaag
gcagaggacaaagcgagtggtaaatcagagaagattacaatcacaaacgagaagggtcgt
ttgagccaagaagagattgaccggatggtgaaggaggctgaggagtttgcagaggaggac
aagaaggtgaaggagagaattgacgccagaaatgccttggagacatacgtgtacaacatg
aagaaccaagtgaatgacaaggacaagcttgcagataaattggaaggtgatgagaaggag
aagatcgaagcagcaaccaaggaagccttggagtggctcgacgagaaccaaaactcagag
aaagaagagtacgatgagaagctcaaggaggtagaagcagtgtgtaacccaatcatcaca
gcagtttaccagagatcaggcggagcaccaggtgcaggcggagagtcaccgactgaggag
gaagatgagtctcacgacgagctctag
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