Capsella rubella (pink shepherd's-purse): 17885106
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Entry
17885106 CDS
T02984
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00020
Citrate cycle (TCA cycle)
crb00785
Lipoic acid metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01200
Carbon metabolism
crb01210
2-Oxocarboxylic acid metabolism
Module
crb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
crb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
17885106
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
17885106
Enzymes [BR:
crb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
17885106
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Ortholog
Paralog
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
17885106
NCBI-ProteinID:
XP_006290542
UniProt:
R0HEH5
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MVWFRAGSNVTKLAVRRILNQGGSYATRTRSIPSQTRSFHSTIFRPKAQSAPIPRAVPLS
KLTDSFLDGTSSVYLEELQRAWETDPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEQREIPEDLDLALYGFTEADLDREFFLGVWQMSGFMS
ENRPVQTLRSILTRLEQAYCGNIGFEYMHIADRDKCNWLREKIETPTPWQYNRERREVIL
DRLAWSTQFENFLATKWTTAKRFGLEGGESLIPGMKEMFDRAADLGVESIVIGMSHRGRL
NVLGNVVRKPLRQIFSEFSGGIRPVDEVGYTGTGDVKYHLGTSYDRPTRGGKKIHLSLVA
NPSHLEAADSVVVGKTRAKQYYSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPNY
TTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAE
WRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIKNHPSTLQIYHKKLLECGEVSQ
QDIDRIQEKVNTILNEEFVASKDYLPKKRDWLSTNWAGFKSPEQISRVRNTGVKPEILKT
VGKAISSLPENFKPHRAVKKVYEQRAQMIESGEGVDWALAEALAFATLVVEGNHVRLSGQ
DVERGTFSHRHSVLHDQETGEEYCPLDHLIMNQDPEMFTVSNSSLSEFGVLGFELGYSME
SPNSLVLWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLVMLLPHGYDGQGPEHSSARL
ERYLQMSDDNPYVIPDMEPTMRKQIQECNWQIVNATTPANYFHVLRRQIHRDFRKPLIVM
APKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVLCSGK
VYYELDDERKKVGATDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEAMNMGAFSY
ISPRLWTAMRSLNRGDMEDIKYVGRGPSAATATGFYTFHVKEQAELVQKAIGKEPIN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtttcgagctggttcgaatgttaccaagctagccgttcggaggattctgaat
cagggtggttcatatgcgacgaggacgcggtctattccttctcagactcgttcctttcac
tcgactattttcagaccgaaggctcagagtgctcctattccaagagctgtaccgctttct
aagctaactgatagtttcttagatgggacgagcagtgtttaccttgaggagttacaaagg
gcttgggaaactgatcctaacagtgtagatgaatcttgggataatttctttaggaacttt
gttggtcaggctgccacttctcccggcatctctgggcagactattcaggagagtatgagg
ctcttgttacttgtgagggcttaccaggtgaatggtcacatgaaagcaaagttggatcct
ttaggtttggaacagcgagagatccctgaggatcttgacttggctctttatggattcact
gaggctgatcttgacagagagttcttcttgggagtgtggcagatgtcgggattcatgtct
gagaaccggccagtgcagacccttcgctccatattgaccaggctcgaacaggcatactgt
gggaacattgggttcgagtatatgcacattgctgatcgggataaatgtaattggttgaga
gaaaagattgaaacgccaactccttggcagtacaacagagagcgccgcgaggtgattctc
gatcggctagcatggagtactcagtttgagaatttcttagctaccaagtggacaacagct
aaaagatttggacttgagggtggagaatccttaatccctggcatgaaggagatgtttgac
agggcagcagacctcggagtagaaagtattgttattggaatgtctcacagaggaagattg
aatgttctgggtaatgttgttcggaagccactccgtcagatatttagtgagttcagtggt
ggtattaggcctgtagatgaagttggctacaccggaactggtgatgtcaaatatcacttg
ggaacctcttatgatcgacctacaagaggtgggaagaaaatccatctctctttggttgct
aatccaagtcacttggaagctgcagattctgttgttgttggcaaaaccagagcaaaacag
tactactccaatgatttagacaggaccaagaatttaggtatattgattcatggagatggt
agttttgctggacaaggggtagtttacgaaactcttcatcttagtgctcttccaaactac
accaccggaggaaccatacatattgtggtgaacaaccaagtggctttcacgacagatcca
agggcggggagatcttcccagtattgtactgatgtcgccaaggctttgagcgctcccatc
tttcatgtcaatggggatgatgttgaggctgttgttcatgcctgcgagcttgctgctgag
tggcgtcaaacttttcattctgatgtagtcgttgatttggtttgctaccgtaggttcggg
cataatgagatagatgagccatcctttactcagccaaaaatgtacaaggttatcaagaat
catccttcaacccttcagatctaccacaaaaagctcttggaatgcggtgaagtatcacaa
caggatatcgaccggatacaggaaaaggttaacacaatcctcaatgaagagtttgtcgct
agtaaagactatctccctaagaaacgagattggctttcaaccaattgggctggatttaag
tctcctgagcagatctcacgagttagaaacactggtgtcaaaccagagatacttaagact
gttggaaaggcaatttcatcgcttccagaaaacttcaagccacacagggcagtgaaaaaa
gtttatgaacaacgtgcccaaatgattgaatcaggagaaggagttgactgggctcttgca
gaagctcttgctttcgctacattagttgtggaaggcaatcatgttcggttgagcggtcag
gatgttgaacgtggaacatttagtcatcgtcattctgtccttcatgaccaggaaactgga
gaagagtattgcccactagatcatctcatcatgaatcaggatcctgagatgtttactgtt
agcaacagttctctctcagaatttggtgtccttggattcgaattgggttactccatggaa
agcccaaattcgttggtactatgggaagctcagtttggagactttgccaatggagctcag
gtgatatttgatcagttcatcagcagtggagaagccaaatggctgcgtcaaaccgggctt
gttatgctacttccacatggttacgatggtcagggacctgaacattcaagtgcgaggttg
gaacgttaccttcagatgagtgatgataatccgtatgtcataccagacatggaaccaaca
atgcgtaagcaaattcaagaatgtaattggcagattgtcaacgccacaactcctgccaac
tatttccatgttctgcggcgacagatacacagggacttccgtaagcctctgattgtaatg
gcaccaaagaacttgctccgtcacaaggactgcaaatcaaatctctcagagtttgatgat
gtccaaggtcacccaggttttgacaagcaaggaactagatttaagagattaatcaaggat
cagaatgatcactctgatcttgaagaaggcatcagaagattggtactttgttccggaaag
gtatattatgagcttgatgatgaacggaagaaggtcggcgcaactgatgttgctatttgt
agagtggaacagctttgtcctttcccatacgatctcattcagcgtgagctcaagagatat
ccaaatgctgagatcgtttggtgccaagaagaggcgatgaacatgggagcattcagctac
atatctccacggctatggacagcaatgagaagcttaaacagaggagatatggaagacata
aagtatgttggtcgtggtccctctgctgcaactgccacgggtttctacacattccatgtc
aaagagcaagccgagctagtccagaaagccatcggaaaggaacccatcaactag
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