Capsella rubella (pink shepherd's-purse): 17891714
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Entry
17891714 CDS
T02984
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00906
Carotenoid biosynthesis
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Module
crb_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
17891714
Enzymes [BR:
crb01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
17891714
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Thi4
NAD_binding_9
FAD_oxidored
Pyr_redox_3
Pyr_redox
HI0933_like
Trp_halogenase
NAD_binding_8
GIDA
FAD_binding_3
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
17891714
NCBI-ProteinID:
XP_023642504
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MDTLLKTPNKLEFFVPQFHGFERLGSNNPNPSRVRLGLKRRAIKIGSGAALLDLVPETKK
ENLDFELPMYDTSKSRVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGV
WVDEFEAMDLLDCLDTTWSGAVVYIDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKF
HQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGIIAE
VDSHPFDVDKMVFMDWRDTHLDSYPELKERNSKIPTFLYAMPFSSTRIFLEETSLVARPG
LRMEDIQERMVARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTG
YMVARTLAAAPIVAKAIVRYLGSPSSSSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDI
LLKLDLEATRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSHASNTSRLEIMTKG
TVPLAKMINNLVQDRD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgttgaaaacacccaacaagctcgaatttttcgtccctcagtttcatggg
tttgagagattaggcagtaacaatccaaacccttcaagggttaggcttggtttgaagaga
agggctatcaaaattggctctggtgctgctcttttggatcttgttcctgaaactaaaaag
gagaatcttgactttgagcttcctatgtacgacacttccaagagtcgagttgttgatttg
gctatcgttggtggaggtcctgctggtttagccgtggctcagcaggtttctgaagctggc
ctctccgtttgttccattgatccctctcctaagctcatatggcctaacaactatggtgtt
tgggttgatgagtttgaggctatggacttacttgactgcctcgataccacctggtctggt
gctgttgtctacatcgatgaaggtgtcaagaaggatttaagccggccttatgggagagtt
aatcggaaacagctcaaatccaaaatgcttcagaaatgtataaccaacggtgttaagttt
catcagtctaaggtcactaatgtggttcacgaggaggcaaactccactgtggtttgcagt
gacggtgtaaagattcaggcttcggtggttcttgatgccacggggttttcccgatgcttg
gttcagtacgacaaaccgtacaaccccgggtaccaagtggcttatgggattatagctgag
gtcgacagtcacccatttgatgtcgacaaaatggtgttcatggattggagagatacacat
ctggactcatatcctgagcttaaagaacggaacagcaagatcccaacattcttgtacgct
atgccattttcttccacccgaatatttcttgaagaaacttctttagttgctagacccggt
ctgcgtatggaagatatccaagaaagaatggttgctagactgaaacatttggggatcaat
gtgaagaggattgaggaagacgagcgttgtgtgatcccgatgggcggtcctttaccagtc
ttacctcaaagggttgtcgggattggtgggacagcaggaatggttcatccttcaactggt
tacatggtagctaggactcttgcagccgcaccaatagtcgcaaaagccattgtgagatac
cttggttcacctagtagtagcagccttagaggagatcaactctctgctgaggtatggaga
gacttgtggcctattgaacggcgtagacagagggaatttttctgttttggaatggatatt
ctgctgaaactcgacttagaagctactagaaggttctttgatgcattctttgatctggaa
cctcattactggcacggattcttgtcttccaggctgtttcttccggaattgttgttcttc
gggttgtcactcttctcgcacgcttccaatacctcaagattggagatcatgacaaaaggg
actgttcctcttgctaagatgatcaacaatttggtacaagatagagattaa
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