KEGG   Capsella rubella (pink shepherd's-purse): 17891861
Entry
17891861          CDS       T02984                                 
Name
(RefSeq) lysine-specific demethylase JMJ30 isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:crb03036]
    17891861
Enzymes [BR:crb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     17891861
Chromosome and associated proteins [BR:crb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    17891861
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 17891861
NCBI-ProteinID: XP_023642598
LinkDB
Position
Unknown
AA seq 418 aa
MSGTTTASSGDFNNLRLPTPTLDAESQTLLQSISAQGGYAYARMAALAVSGDQSAAEAAR
DMAWEQLHSGPWHSVLPVWRDAYSMACLNVAKIHFAAGEFGEALGALDMGLIMGGMLLRK
DLHDSVLFVSSEARKKTKSLEEASGDFKGEKLVPELPVDVNEVLKILPCRSLSCRRVEKR
SGLSLEGFLRDYFLSGTPVVITNCMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCS
DWKQELVTFSQFLERIQTNRSSSMEPTYLAQHPLFDQINELKDDICIPDYCFVGGGEIQS
INAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPSSVQDELYPYSETMLCNSSQVDLD
NMDNTEFPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSFSVSFWWSNETDSSSS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcaggaaccaccactgcttcctccggagacttcaacaacctccgtctccctactccg
acgctagacgccgaatctcaaaccctgctgcaatccatctcagctcaaggcggttacgcc
tatgctcgcatggcggccttagctgtttccggtgaccaaagcgcggcggaggcggcgcgt
gatatggcttgggagcaacttcactccggtccatggcactcggttctccccgtatggcgc
gacgcttactcaatggcttgtctcaacgtcgctaaaatccatttcgccgccggcgagttt
ggtgaggcgcttggggcgcttgatatgggtctcatcatgggagggatgcttctccgcaag
gatcttcacgattctgttctgttcgtctcctcggaagctcgtaagaagacgaagagtctt
gaagaagcttctggagatttcaaaggtgagaaactggtcccggaacttcccgtcgacgtc
aatgaggtgcttaagattctaccttgcaggtcattaagttgtagaagagtagagaagagg
tctggtttatctttggaggggtttctgcgtgattattttctgtcaggtacaccagttgta
ataaccaattgcatggctcattggccagccaggaccaagtggaaccacttggactacctc
aatgctgttgctggtaaccgaaccgttcccgtggaggtggggaaaaactatttatgttct
gattggaagcaagagcttgtgacattttctcagttccttgaacggattcaaaccaataga
tcttcttccatggaacctacttatcttgcccagcatccattgtttgatcagataaacgaa
ctgaaagatgatatatgtattcctgattactgttttgtcggtggcggggaaatccaatct
attaatgcatggtttggcccggctgggacagtcactccgttacaccatgatccacatcat
aatatacttgctcaggttgttggcaaaaagtatataaggctttacccatcctccgtgcaa
gatgaactttacccttactctgagacaatgctctgcaactctagccaggttgatctggac
aatatggacaacactgagttcccaaaggcaatggagttggagttcatggattgtattcta
gaagaaggtgaaatgctgtacatccctcccaaatggtggcactatgtcaggtccttaaca
atgagcttctcagtcagcttctggtggagcaatgaaaccgattcttctagctcctag

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