Capsella rubella (pink shepherd's-purse): 17898342
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Entry
17898342 CDS
T02984
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00600
Sphingolipid metabolism
crb01100
Metabolic pathways
Module
crb_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
17898342
Enzymes [BR:
crb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
17898342
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Ortholog
Paralog
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
17898342
NCBI-ProteinID:
XP_006304864
UniProt:
R0GP88
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MSQTIPLFSPSQSPRRKKKMDSFSYSSMKSMVIQARGSLNSRLSEFEPLLLLLAPLLTLF
LAQIIGSVFGVVHDKGLKACLVGFIMGFLKMIPGVQNYIDAEKQKVVDQLQSGSSSKKKN
RAEVLPVKGLGVEVLEKMEIEKRNDAIWQGKCSGTVYIGGGESEGHFALINQACSMFAHT
NPLHIDVFQSVVRFESEVVAMTAALLGSKETVSGGQICGNMTSGGTESIVLAVKSSRDYM
KYKKGITRPEMIIPESGHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIRRHINRNTIMIV
GSAPGFPHGIIDPIEELGQLALSYGICFHVDLCLGGFVLPFARKLGYQIPAFDFSVQGVT
SISVDVHKYGLAPKGTSTVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAW
AAMMSLGEEGYLQNTSKIMEASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVND
IMSSKGWHLNALQRPNSIHICITLQHVPVVDDFLRDLREAVETVKANPGPITGGLAPIYG
AAGKMPDRGMVNELLVSFMDSQY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaacgattccacttttctcaccatctcaatctcccagaagaaaaaaaaaaatg
gattctttttcatattcatcgatgaaatccatggtgattcaagctcgaggctcgttaaac
tcgcgtttgtctgagtttgagcctctgcttctgctcttggctccgcttctcactcttttt
ctcgctcagatcatcggatctgtctttggcgttgttcacgataaaggattgaaagcgtgt
cttgttgggtttatcatgggattcctcaaaatgattcctggagttcagaattacatagat
gctgagaaacagaaggttgttgatcaattacaatctggtagcagctccaagaaaaagaat
cgggctgaagtattgcctgtaaaaggtctaggagttgaagttcttgagaaaatggagatt
gaaaagaggaatgacgctatttggcaaggaaaatgctctggcactgtatacataggtgga
ggcgagtctgaaggacattttgcattgataaatcaagcatgttcaatgtttgcgcatacc
aatcctttgcatattgatgtattccagagtgtggtgcggtttgagtcagaagtagtcgca
atgactgctgcgttactaggcagtaaagaaacagtttcaggaggacaaatatgcggaaac
atgacatctggaggaacagaaagtattgtgttagcagtaaagtcatctcgtgactatatg
aagtacaagaagggaatcacacggccagaaatgattatacctgaatcgggtcattcggct
tatgataaggcggcccagtactttaacatcaagttgtggcgagttccagtagacaaagaa
ttcagagctgatgtgaaggcaataaggcggcatattaacagaaacaccatcatgattgtt
gggtcagcaccaggattccctcatggcataatcgatcctattgaggagcttggtcaactg
gctcttagctatggaatatgctttcatgttgacctttgtcttggtggttttgtgttacct
ttcgctcggaaacttgggtaccagatcccagcttttgatttttctgtacaaggagttact
tcaatttcggtggacgtgcataaatatggtttagctcctaaaggaactagtacagttctc
tacagaaatcatgagatcagaaagcaccaatttgttgctgtaactgaatggtcaggaggt
ctatacgtgtctccaactatagctgggagtaggcctggttctctggttgctggtgcttgg
gctgcaatgatgtctctcggcgaggaaggctatctacaaaacactagcaagataatggaa
gcatcaaagagactagaagaaggagtaagagaaatccatgaactgttcgtcattggaaag
ccagatatgacaattgtggcgtttggttctaaggcattagatatctttgaagttaatgac
atcatgtcttcaaaaggttggcatttgaacgcactacagagacccaacagcattcatatt
tgtataactcttcagcacgtccctgtagtcgatgacttcctccgggatctgcgtgaagct
gtagaaactgtgaaagcaaacccgggaccgatcactggaggcttggccccaatatatgga
gctgcagggaagatgccggaccgaggtatggtgaatgagcttctggttagtttcatggac
agtcaatattaa
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