KEGG   Chlamydomonas reinhardtii: CHLRE_03g179961v5
Entry
CHLRE_03g179961v5 CDS       T01039                                 
Name
(RefSeq) uncharacterized protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cre  Chlamydomonas reinhardtii
Pathway
cre03030  DNA replication
cre03410  Base excision repair
cre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLRE_03g179961v5
   03410 Base excision repair
    CHLRE_03g179961v5
   03420 Nucleotide excision repair
    CHLRE_03g179961v5
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cre03032]
    CHLRE_03g179961v5
   03400 DNA repair and recombination proteins [BR:cre03400]
    CHLRE_03g179961v5
Enzymes [BR:cre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CHLRE_03g179961v5
DNA replication proteins [BR:cre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    CHLRE_03g179961v5
DNA repair and recombination proteins [BR:cre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      CHLRE_03g179961v5
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B_exo2 DNA_pol_B RNase_H_2
Other DBs
NCBI-GeneID: 5728795
NCBI-ProteinID: XP_042926160
LinkDB
Position
3:complement(4950878..4970943)
AA seq 2268 aa
MSGRGRGRGLTSLRAFDASEPGGGRGGRGGQGRGRGYKKPLNANLNYMPRDGGNGNEEDN
SAKLAQVRAEDALDEGLGWKLFTTGEDRLGWLMNIQSSHMADKDTGQVVASVDCYFMCQD
GSMFKARLAFAPYFYVRVQEGREVEAENYLRRKCEGAVREVAVVEREDLDLKNHLSGIRR
RLLRVSTYTVQQLMEVRKEVAPLVAANTRRAATTSAYSMAGGGAGAGGGGGGGGGGASTG
GLGGGGAGLGAAEAGLQQLLQGQEAAGGGGRNGGGRGQDIREAFLEMREYDVPYHIRFAI
DTDVRVGHWYTVRCHEGVTSLDRRHDLLQRAEPRICAFDIETTKLPLQFPNAEYDQVFMI
SYMLDRQGYLIVNREVVGADIADFEYTPKPEFEGPFKVTNAANERELLQAFFSHMRSAQP
AIYVTYNGDFFDFPFIEARCAVLGLDMHESIGFRCRGGQGSGPGAAKECLSRSAVHMDCM
HWVDRDSYLPQGSRGLKSVTKYKLGYDPVEVHPEDMVRLARETPQAMASYSVSDAVSTYY
LYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEQLLMVEAYRANIACPNKHVGEREAMY
RGHLLQAETYIGGKVEALESGVFRADLPLKFKCKPAAYQMLLDNLDRDLGYALVHEAKWG
AGQEDAANYAAVREAIAAKLTALRDAPNREEAPLIYHLDVAAMYPNIILTNRLQPSAIVT
EEDCAACDFNAPGKRCLRQMEWVWRGEHYSASRSEYLQIKAQLAAETFPPAPPRFPNSGF
GGGGGGGGGGGYGGGGGYGGGGGGGADGDMGGPRTWAELGQEEQQKFLQERLKKYCQKVY
KRVLDKPVTELRVAGICQRENSFYIDTRANKLVLDLGRTLELDTDGIWCALPGSFPENFK
FKNKNGKEFKLSYPCCVLNVMVAQHNTNDQYQTLVQPPPGQPPPAGPPRYTVSSEMSIEF
EVDGPYKAMILPASKEEGKSIKKRYAVFNFDGSLAELKGFEVKRRGELKLIKVFQAEVFE
QFLSGSSLEECYAAVGAVANRWLDLLDTRGADLTDEELLGYISEATTMSKALAEYEGRKS
CAISTANRLAAFLGDERIKDKGLNCTYVIARQPASQPTSERAIPVSIFQAEPAVARAWLR
KWCGGDVGSTDGVPDVRDIVDWDYYRERLGSAVQKIITIPAALQGLANPVPRVKHPDWLH
KRIRERTDKCQQLKMHDLLARMRNKAAVEAAEAEADGAKAGGGGSQNAGAGADVDDLEDL
FGGSGGSGGRKKTAAAKTLGKAAREARAAAADVAEGGAGGGDADMGGEGQDDKENAPAAA
NQANNNNQQPQPPMWCLALGKLHSVTLVVPRSFLVDSRLQAPELLAAALSAGVAAGGGGA
HGLGLEVAAVGGAVALPGGRRPQHLYRVTLPEAAYRSEAPRLAAALSAEHVAGVYEDRLP
AALPAVLALGCVVSVAQDSRARPLAAPWRLQDFRMRTTGEVGYLDSEPEPEPAAAAGAAA
APQEAPGLRLGLRHVVLYSSLDGSGRGLFALTAPAQQRGHIILLQPSAAAAREVAPALLE
RLWREARAAAAAEGGPAEPERLTWEVSYERDALDAGRTLQRALMSYRSAVRAPSVVVVQG
PVPAARLRRDMSVLHDMPCLDMPCHADDSRYPPLQWQARAARRALHRCAGAGLWLAERAA
LCRYAHAPLANLDPSGGGCGAGAGGAGGAGGAGGGEALGGGIGSVADMLMCRRLRDAGLT
LPVVDPALPDLGGLETENGPAEPAQSAGIDAPVTPSIADTLLQNLYRWLSSPASPLHDPG
LHRAVLVLQHKLFLQLCAELRRLGAVIVAANTNAITICTGKRHVRAAAGYTRFLLDALKG
RELFRWLDLHPAAWYHAYMYRDGYNWAGLESAAAPAEWRRLAEAGAGAGTAAAAEEEAGQ
EGDAAAAADDEPVVKFVWNLKEHLPPAVQQDLVLLLTEFLYLPWREARKALQQQQQQQQA
GAAAAGADAGGGSQAVPASQGGSTQAAVASTRAEEVQSTFLGSLVADVFTQRLLARVSVW
RAVTPGSAPEWTFPQLAGSYLRPDELGHPALAFVRVATHLLALDGRVGEAVLLLRRQLLK
ALHVNEFSTEAEFKELCQPFVMPDVICSYCNDCRDLDLCRDEALAQHDWRCRACRQQLDT
AGLERRLVGLLRREEAAYQTQDLACVKCKQVTSGHLRSLCGLCGGGLVVTRGPEAAARRL
TVFRNLARFHGFGMLRELAGWLLGEEPEEAERERQADAEEAAAAAEGR
NT seq 6807 nt   +upstreamnt  +downstreamnt
atgtctgggcgcgggagaggccgaggccttacctcgctccgcgctttcgatgcgtcggag
cctggaggaggtcgtggaggccgtggtggccaggggcgaggccgaggctacaagaaaccg
ctcaatgccaacctgaactatatgccccgcgacggaggcaacgggaacgaggaggacaac
agcgccaagctggcccaggtccgcgccgaggacgcgctggacgaggggctgggctggaag
ctgttcaccaccggcgaggatcgcctgggctggctcatgaacatacagtcgtcccacatg
gccgacaaggacacgggccaggtggtggcctcggtggactgctacttcatgtgccaggac
gggtccatgttcaaggcgcggctggcgttcgcgccctacttctacgtgcgggtgcaggag
ggccgcgaggtggaggctgagaactacctgcggcgcaagtgcgagggcgccgttcgggag
gtggcggtggtggagcgggaggacctggacctgaaaaaccacctgtcgggcatccggcgg
cggctgctgcgcgtgagcacctacactgtgcagcagctgatggaggtgcgcaaggaggtg
gcgccgctggtggcggccaacacacggcgcgcggccaccacctccgcatacagcatggcg
ggcggcggcgcgggagccggcggcggcggcggcggcggcggcggcggcgcgtccacgggc
gggctgggcggcggcggcgcggggctgggcgcggcggaggcggggctgcaacagctgctg
caggggcaggaggcggcaggcggcggaggccggaacggcggcggcaggggccaggacatt
cgcgaggcctttctggagatgcgcgagtacgacgtgccctaccacatccgcttcgccata
gacacagacgtgcgcgtggggcactggtacacggtccgctgccacgagggtgtgaccagc
ctggaccggcgtcacgacctgctacagcgcgccgagccgcgcatctgcgccttcgacatc
gagaccaccaagctgccgctgcagttcccaaacgccgagtacgaccaggtgttcatgatc
tcctacatgctggaccggcagggctacctgattgtcaaccgcgaggtggtgggcgcggac
atcgccgacttcgagtacacgcccaagcccgagttcgaggggcccttcaaggtgaccaac
gccgccaacgagcgcgagctgctgcaggcgttcttctcccacatgcgctccgcccagccc
gccatctacgtcacctacaacggcgacttcttcgacttccccttcattgaggcgcgctgc
gcggtgctggggctggacatgcacgagtccatcgggttcaggtgccgcggcggtcagggc
agcggccccggcgccgccaaggagtgtctgtctcgctcggccgtgcacatggactgcatg
cactgggtagaccgcgactcgtacctgccacagggcagcaggggcctcaagtctgtgacc
aagtacaagctgggctacgaccctgtggaggtgcacccggaggacatggtgcgactggcg
cgggagacgccgcaggccatggccagctactctgtgtccgacgccgtgtccacctactac
ctgtacatgacctacgtgcaccccttcatcttctccctcgccaccatcatccccatgccg
ccagacgaggtgctgcgcaagggcagcggcacgctgtgcgagcagctgctcatggtggag
gcctaccgcgccaacatcgcctgccccaacaagcacgtgggcgagcgcgaggccatgtac
cgcggccacctgctgcaggccgagacttacatcggcggcaaggtggaggcgctggagagc
ggcgtgttccgggcagacctgccgctcaagttcaagtgcaagccggccgcctaccagatg
ctgctggacaacctggaccgcgacctgggctacgcgctggtgcatgaggccaagtggggc
gcggggcaggaggacgccgccaactacgccgcagtgcgggaggccatcgcggccaagctg
acggcgctgagggacgcgcccaaccgcgaggaggcgccgctgatctaccacctggacgtt
gctgccatgtaccccaacatcatcctcaccaaccgcctgcagcccagcgccatcgtcacg
gaggaggactgcgccgcctgcgacttcaacgcgcccggcaagcgctgcctcaggcagatg
gagtgggtgtggcgtggcgagcactactcggccagccgcagtgagtacctgcaaatcaag
gcgcagctggcggcggagacattcccgcccgcgccgcccaggttccccaacagcggcttc
gggggaggcggcggcggaggcggcggaggcggctatggaggcggcggaggctatggaggc
ggcggcggcgggggtgccgacggcgacatgggcgggccgcgcacgtgggcggaactgggc
caggaggagcagcagaagtttctgcaggagcgcctcaagaagtactgccaaaaggtgtac
aagcgcgtgctggacaagccggtcacggagctgcgggtggccggcatctgccagcgcgag
aactccttctacatcgacacgcgcgccaacaagctggtgttggacctgggccgcaccctg
gagctggacacggacggcatctggtgcgccctgcccggcagcttccccgagaacttcaag
ttcaaaaacaagaacggcaaggagttcaagctgtcctacccctgctgtgtgctcaacgtc
atggtggcccagcacaacaccaacgaccagtaccagacgctggtgcagccgccgccgggg
cagccgccgccggccgggccgccgcgctacacggtcagcagcgagatgtccatcgagttc
gaggtggacggaccctacaaggccatgatcctgcccgccagcaaggaggagggcaagtcc
atcaagaagcgctacgccgtgttcaacttcgacggcagcctggcggagctcaagggcttc
gaggtgaagcgccgcggcgagctcaagctcatcaaggtgttccaggcggaggtgtttgag
cagttcctgtcgggcagctctctggaggagtgctacgccgccgtgggcgctgtggccaac
cgctggctggacctgctggacacgcgcggcgccgacctcacggacgaggagctgctgggc
tacatcagcgaggccaccaccatgagcaaggcgctggcagagtacgagggccgcaagtcg
tgcgccatctccaccgctaaccggctggccgccttcctgggcgatgagcgcatcaaggac
aagggcctcaactgcacctacgtcatcgcgcgccagcccgccagccagcccaccagcgag
cgcgccatccccgtgtccatcttccaggccgagccggcggtggcgcgcgcctggctgcgc
aagtggtgcggcggcgacgtaggctccacggacggtgtgcccgacgtgcgcgacattgtg
gactgggactactaccgcgagcggctgggcagcgccgtgcagaagatcatcaccatcccc
gcggcgctgcagggcctggccaaccccgtgccgcgggtcaagcaccccgactggttgcac
aagcggatccgcgaacgcaccgacaagtgccagcagctcaagatgcacgacctgttggcg
cgcatgcgcaacaaggcggcggtggaggcggcggaggcggaggcggacggcgccaaggcc
ggaggcggcggcagccaaaatgcgggcgcgggggcggatgtggatgacctggaggacctg
ttcgggggcagcggcggcagcggcggccgcaagaagacggcggcggcaaagaccctgggc
aaggcggcgcgggaggcgcgcgctgcggcggcggacgtggcggagggcggggccggcggt
ggtgatgcggacatgggtggcgaggggcaggacgacaaggagaacgcccccgcggcggcc
aaccaggccaacaacaacaaccagcagccgcagccgccgatgtggtgcctggcgctgggc
aagctgcactcggtgacgctggtggtgccgcgctccttcctggtggactcgcgcctgcaa
gcgcccgagctgctggcggcggcgctcagcgccggggtggcggcgggcggcggcggcgca
cacgggctggggctggaggtggcggcggtgggcggcgcggtggcgctgccgggcggccgg
cggccgcagcacctgtaccgggtgacgctgcccgaggcggcctaccgctccgaggcgccc
cgcctggccgcggcgctgtcggcggagcacgtggcgggcgtgtacgaggaccgcctgccc
gccgcgctgcccgccgtgctggcgctgggctgcgtggtgtcggtggcgcaggacagccgg
gcgcggccgctggcggcgccgtggcggctgcaggacttcaggatgcgcaccacgggcgag
gtgggctacctggactcggagcccgagccagagccggcggcggcagcaggagcggccgcg
gcgccgcaggaggcgcccggtctgcggctggggctcaggcacgtggtgctgtacagctcc
ctggacggctccggccgcggcctgttcgcgctcaccgcccccgcccagcagcgcggccac
atcatcctgctgcagccctcggccgccgccgcgcgcgaggtggcgccggcgctgctggag
cggctgtggcgcgaggcgcgcgccgccgccgccgccgagggcggcccggcggagccggag
cggctcacgtgggaggtgtcgtacgagcgggacgcgctggatgcgggccgcacgctgcag
cgggcgctgatgtcgtaccgcagcgccgtgcgggcgcccagcgtggtggtggtgcagggg
ccggtgccggcggcgcggctgcggcgggacatgtcggtgctgcacgacatgccctgcctg
gacatgccctgccacgccgacgacagcaggtacccgcccctgcagtggcaggcgcgcgcc
gcccgccgcgcgctgcaccgctgcgccggcgccgggctgtggctggccgagcgcgccgcg
ctgtgccgctacgcgcacgcgcccctcgccaacctcgacccctcgggcggcggctgcggc
gcgggcgccggcggcgcgggcggtgcaggcggcgcgggcggtggcgaggctctgggcggc
ggcatcggcagtgtggcggacatgctgatgtgccggcggctgcgggatgcgggcctgacg
ctgccggtggtggacccggcgctgcctgacctgggaggtctggagacagagaacgggccg
gcggagcccgcacagtctgctggcattgacgcccccgttactccctcgatcgcggacacg
ctgctccagaacctgtaccgctggctgtcctctcccgcctcgccgctgcacgaccccggc
ctgcaccgcgccgtgctggtgctgcagcacaagctgttcctgcagctgtgcgccgagctg
aggcgcctgggggcggtcatcgtggccgccaacaccaacgccatcaccatctgcaccggc
aagcgccacgtgcgcgcggcggcgggctacacccgcttcctgctagacgcgctcaagggc
cgcgagctgttccgctggctggacctgcaccccgccgcctggtaccacgcctacatgtac
cgcgacggatacaactgggcggggctggagagcgcggcggcgcccgcggagtggcggcgc
ctggcggaggccggcgcgggggcgggcacggccgcggcggcggaggaggaggcggggcag
gagggcgatgcggcggcggcggcggatgacgagcccgtggtcaagttcgtgtggaacctt
aaggaacacctgccgccggcggtgcagcaggacctcgtgctgctgctcacagagttcctg
tacctgccctggagggaggcgcgcaaggcgctgcagcagcagcagcagcagcagcaggcg
ggggcagcggcagcgggggcagacgcgggaggcggcagccaggcggtgccggccagccag
ggcggcagcacgcaggcggcggtggccagcacgcgcgcggaggaggtgcagtccaccttc
ctgggctccctggttgcggacgtgttcactcagcggctgctggcccgcgtgtcggtctgg
cgcgccgtcacgccgggcagtgcgcccgagtggaccttcccgcagctggcgggcagctac
ctgcggccggacgagctgggccaccccgcgctggcgttcgtgcgtgtggccacccacctg
ctggcgctggacgggcgtgtgggcgaggcggtgctgctgctgcggcggcagctgctcaag
gcgctgcacgtgaacgagttcagcaccgaggccgagttcaaggagctgtgccagcccttt
gtcatgcccgacgtcatctgcagctactgcaacgactgccgcgacctggacctgtgccgc
gacgaggcgctggcgcagcacgactggcgctgccgggcctgccgccagcagctggacacg
gcggggctggagcggcggctggtggggctgctgcggagggaggaggcggcctaccagaca
caggacctggcgtgcgtcaagtgcaagcaggtaacgtccggccacctgcgtagtctgtgc
gggctgtgcggcggcggcctggtggtcacgcgcggccccgaggcggcggcgcggcggctc
accgtgttccgcaacctggcccgcttccacggctttggcatgctgcgcgagctggcgggc
tggctgctgggcgaggagccggaggaggcggagcgggagcgccaggcggacgccgaggag
gcggcggcggcggcggagggccggtag

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