Magallana gigas (Pacific oyster): 105326362
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Entry
105326362 CDS
T03920
Name
(RefSeq) pyruvate carboxylase, mitochondrial-like isoform X1
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00020
Citrate cycle (TCA cycle)
crg00620
Pyruvate metabolism
crg01100
Metabolic pathways
crg01200
Carbon metabolism
crg01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
105326362
00620 Pyruvate metabolism
105326362
Enzymes [BR:
crg01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
105326362
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
HMGL-like
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
NQRA
Biotin_lipoyl_2
RnfC_N
RimK
ATPgrasp_ST
HlyD_3
ATP-grasp_3
GCV_H
Motif
Other DBs
NCBI-GeneID:
105326362
NCBI-ProteinID:
XP_011424654
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Position
LG3:complement(14326934..14351097)
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AA seq
1220 aa
AA seq
DB search
MFRLQARLSTLCQSARVQLPDVARGHNHHGYKLPPGVACCSTQAKSQSKPEEKIKKLMVA
NRGEIAIRVFRACTEMNIQTVAIYSEQDMMHMHRQKADESYLIGKGLPPVAAYLNIPEII
QVAKENGVDAIHPGYGFLSERDDFAQQVLDAGIRFIGPSPEVVRKMGDKVEARQAAIAAG
VQVVPGSDGPVASIEEARHFCEQYGLPVIFKAAYGGGGRGMRIVRSMEEVDENFRRATSE
AEAAFGNGALFLEKFIERPRHIEVQILGDRGGNVVHLYERDCSVQRRHQKVVEIAPAPKL
PLDIRDKMTADAVKLARFVGYENAGTVEFLLDPSGQYYFIEVNARLQVEHTVTEEVTGID
LVQSQIQIAEGKLLPEMGLSQDEIELHGCAIQCRMTTEDPARGFQPDTGRIEVFRSGEGM
GIRLDSALGFAGAIISPYYDSLLVKVIAKARDHPAAAAKMLRTLKEFRIRGVKTNIPFLL
NVLQHDQFLSGVVDTYFIDENPQLFKFYPTQNRAQKLLYYLAQVMVNGPQTPLATDLQPS
DVVPSVPQLPFDRESDIENGDNSYGYYEEMRSMAPTPPTGWRDVLVKEGPEAFAKKVREH
KGLLLMDTTFRDAHQSLLATRVRTYDLKRISPFVTQRFNNLYSLENWGGATFDVAMRFLH
ECPWERLEEMRKLIPNVPFQMLLRGANAVGYTNYPDNVVYKFCDMAVKSGMDIFRIFDSL
NYLPNIVVGMDAVGKAGGVIEAAISYTGDVSDPSKTKYNLEYYVNLATELVKAGTHILSI
KDMAGVLKPRAATMLVGALREKFPDIPIHVHTHDTACAGVASMLAAAQAGADVVDVAVDS
MSGLTSQPSMGAVVAALEGTDLDTGISLSDVTDYSAYWEQTRNLYAPFECCKTLKSGNSD
VYINQIPGGQYTNLQFQAFSLGLADQFEEVKKMYAEANQLLGDIPKVTPSSKVVGDMAQF
MVQNKLTKEMVEDRAEELSFPVSVIEYFQGYLGVPPGGYPEPLRTKILKGQQGLDSRPGE
SLPPVDFDKLKADLVEKHGHDVKEQHVISAALYPKVTDDFLEFHDKYGPVDALDTKIFFV
GPKVAQEMEVKIEKGKTLSIKTLACGDLNKNGEREVFFELNGQLRSVKIKDEEASKELHF
HPKALKGVRGSVGAPMPGEVIDVKVKEGDKVEKGQPVLVLSAMKMEMVVTAPASGTVRSI
AVEKKMKLEGDDLLMDIECD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggttgcaagctcgactgtcgaccctgtgtcagtcagccagagtgcaactgccc
gacgttgctaggggacacaatcaccatggttacaagctgcccccaggggtggcatgttgc
tcaactcaagccaagtcgcaaagcaaaccagaggagaaaatcaagaaactgatggttgct
aacagaggtgagattgccatcagagtgttccgagcatgtacagaaatgaacatacaaact
gtggccatctactcagaacaagacatgatgcacatgcatcgtcagaaggcagacgagtcc
tacctgattgggaaaggcttgccgccagtggctgcctatctcaatattccagagatcatt
caggtcgcaaaggaaaacggtgttgatgccatacatcctggctatggcttcctatcagag
agagatgatttcgcacagcaggtgttggatgcagggatcagattcattggtccttcccca
gaggttgtaaggaaaatgggggataaagtagaagcaaggcaggcagccattgctgctggg
gtacaggtggttcctggatcggatgggccggttgccagtatcgaggaggccagacatttc
tgtgaacaatacggactgcccgtcatcttcaaggccgcgtacgggggaggggggcgaggc
atgaggattgtcaggtcaatggaggaggtggatgagaatttcaggagagcaacgtcagag
gctgaggcagcttttggaaatggagctttattcctggagaaattcattgaaagacccagg
cacattgaagtacaaattttgggtgacagaggtgggaatgttgtccatctgtatgagagg
gactgctccgtacagcgacgtcatcagaaggtggtggagattgcccccgccccaaaactt
ccactggacattagagacaagatgactgctgacgctgtgaaactggcccggtttgtgggg
tatgagaacgcaggtaccgtggagtttctgttggatccctcaggacagtattactttatt
gaggtcaatgctcgtctacaggtggaacatactgtcactgaggaagtcactgggatagat
ttggtgcaaagtcagattcagatagcggaggggaagttgctgccggagatgggcctcagt
caagatgagatagaattgcacggctgtgccatccagtgtagaatgaccaccgaggacccc
gcccgaggcttccagccggacacaggcagaatcgaggtatttaggagtggagagggtatg
ggaattcgactggacagtgccctggggtttgctggggccatcatctctccctactatgat
tctctgctggtcaaggtcatcgccaaggccagggatcatccagctgccgctgctaagatg
ttaagaactctcaaagagttcagaatcagaggggtcaagaccaacattccattcctgttg
aatgtccttcaacatgaccagttcctgtcgggagtagtagacacctactttattgacgag
aacccacagctgtttaaattctaccccacccagaaccgagcccagaagctgctgtactac
ctcgctcaggtcatggtcaacggcccccagacacccctagcaaccgacctacagccctcg
gatgttgtcccctctgtaccccagcttccttttgacagagaatctgacatagaaaatggt
gacaacagttatggatattatgaggagatgcgttctatggcccccaccccacccaccgga
tggagggatgtactggtcaaggagggaccagaggcctttgctaagaaggtcagagagcat
aagggattattgttgatggacacgaccttcagagatgcccaccagtcactcttagcaacc
agggtcaggacctatgacctcaagagaatctcaccgtttgtgactcagcggttcaacaat
ctgtacagcttagagaactggggaggtgccacctttgatgttgctatgcgcttcctccac
gagtgtccatgggaaagactggaagagatgaggaagctcatccccaatgttcctttccag
atgcttttgaggggtgccaacgctgtgggctacaccaattaccctgacaatgtggtctac
aagttttgtgacatggctgttaagagtgggatggacatttttagaatctttgactccctg
aactatctcccaaatattgttgtcggaatggatgcagtagggaaagcaggtggagtgata
gaagcagcaatctcctacactggtgatgtctcggaccccagtaaaactaagtataatctg
gagtactatgtcaatctggccacagaactggtcaaagcaggaactcatattctcagtatt
aaggatatggcaggtgtcctgaaaccaagggcagctacaatgttggttggggccttgagg
gagaaattccctgacatcccaatccatgtccacacccacgacacggcctgtgcgggggtg
gcatccatgttagcggcagctcaggcaggagccgatgtggtagatgtggcagtggactcc
atgtctggtctgacctcacaacccagcatgggggcagtggtagcagccctcgagggaacg
gacctggatacaggtatctctttgtctgatgtaacagattactctgcgtactgggaacag
accaggaatctgtacgctccttttgaatgctgcaaaacgctgaagagtggcaactctgat
gtctatataaaccagattccaggtggccaatacacaaacctgcagttccaggctttcagt
ctcgggttagcggatcagtttgaggaggtgaagaagatgtatgcggaggccaatcaactc
ctgggagatattccaaaggtgactccttcctcaaaagtggtgggagatatggcccagttt
atggttcagaacaaactaaccaaggaaatggtggaggaccgtgcagaggagttgtctttc
cctgtgtcggtgattgaatacttccagggatatctcggagtaccgccagggggttatccg
gaaccactcaggaccaagattctgaagggacagcaaggtctggacagtaggcctggtgag
tcgctcccccctgttgattttgacaaactgaaggcggaccttgtcgagaagcatggtcac
gatgtgaaggagcagcatgtcatcagtgctgccctctatccaaaggtcactgatgacttc
ctggagttccatgacaagtacggccctgtcgatgcactcgacacaaagatcttctttgtt
ggacctaaagttgctcaggagatggaggtgaaaatagagaaaggaaaaactctgtctatt
aaaactttggcatgtggagatctaaacaagaatggagagagagaagtgttctttgaactg
aacggacaactaagatctgtcaagattaaagatgaggaggcttctaaggagctgcatttc
catcctaaggcattgaaaggagtgagggggtcagttggggcaccaatgcccggggaagtg
atcgatgtcaaggtcaaagaaggtgacaaggtagagaaaggtcagccggttctggtgctc
agcgccatgaagatggaaatggtggtgacggcaccagcctcaggaacagtgcggtccatc
gcggttgagaagaaaatgaagttagagggggatgatttgttgatggacattgagtgtgac
taa
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