KEGG   Magallana gigas (Pacific oyster): 105336503
Entry
105336503         CDS       T03920                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03020  RNA polymerase
crg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105336503
  09124 Replication and repair
   03420 Nucleotide excision repair
    105336503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crg03021]
    105336503
   03400 DNA repair and recombination proteins [BR:crg03400]
    105336503
Transcription machinery [BR:crg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105336503
  RNA polymerase III system
   RNA polymerase III
     105336503
  RNA polymerase I system
   RNA polymerase I
     105336503
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105336503
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 105336503
NCBI-ProteinID: XP_011439150
UniProt: K1PMI8
LinkDB
Position
LG5:complement(18261568..18269970)
AA seq 128 aa
MADDEHDVDNFDDDIDDDDEPLDEAVETQDDGDPIDILPADQATQAVEPQKRITTPYMTK
YERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRFLPDGSFEDWG
IDELLMTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcggatgatgaacacgatgtcgacaactttgatgatgatattgatgatgatgacgaa
cctcttgatgaagcagtggaaactcaagatgatggtgacccaatagacatcctcccagct
gatcaagcaactcaagctgttgagccccaaaaacgaatcacaaccccatacatgaccaaa
tatgagcgtgcaagagtcttaggaacaagggcactgcagattgctatgtgtgcacctgta
atggtggaattagaaggagagactgacccactactgattgccatgaaagaactcaaagcc
aggaaaatccccattattattcgccgatttctccctgatggaagttttgaggactgggga
atagatgaactcttgatgacagagtga

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