Magallana gigas (Pacific oyster): 105343833
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Entry
105343833 CDS
T03920
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
crg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105343833
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105343833
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105343833
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105343833
03036 Chromosome and associated proteins [BR:
crg03036
]
105343833
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105343833
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105343833
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105343833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
CLASP_N
PDS5
Cnd1
M11L
Motif
Other DBs
NCBI-GeneID:
105343833
NCBI-ProteinID:
XP_034303479
LinkDB
All DBs
Position
LG7:61945971..61963176
Genome browser
AA seq
590 aa
AA seq
DB search
MASSETTDESLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELIPFLTDTI
YDEDEVLLALAEQLGNFTPLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRNIATQH
SPADLENHFVPLVKRLSAGDWFTSRTSACGLFAVCYPRVSSSVKAELRQHFRNLGGDDTP
MVRRAAAGKLGDFAKAVEIEYLKSDLIPLFTALAQDEQDSVRLLDVEACVSIASLLPPDD
VEQYVMPTLRQAADDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFCSLLKDCEAEVR
AAASHKVKDFCQNLSPDVRESVIMTNILPCVKDLVSDANQHVKSALASVIMGLSPILGKD
NTIEHLLPLFLTQLKDECPEVRLNIISNLDCVNEVIGIKQLSQSLLPAIVELAEDTKWRV
RLAIIEYMPLLAGQLGVDFFDEKLNSLCMTWLVDHVFAIRDAATVNLKKLVEKFGVDWAQ
QTVIPKVLQMSRDTNYLHRLTCLFCINLLSEACGPEMTLKLMLPTILNMAGDNVPNVRFN
VAKSILRLGKMLDQSVAQQQVKPVLDKLKADSDIDVQYYALEAIDVIVKS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagcgagacgactgacgaatccctctatcccatcgctgttttgatagacgag
ctaagaaatgaagatgttcagcttcgtctcaacagtatcaagaagctgtcgacaatagca
ctggcccttggagtggagagaacaaggagtgagctgattccgtttctgacagacacaatt
tatgatgaagatgaggttctgttggccctggctgagcagttgggtaacttcactcctctg
gtcgggggaccggagtacgtccattgtctgctgcccccactagagagcctcgctacagta
gaggagacggtggtcagggataaagcggtggagtccctcagaaacatcgccacccagcac
tcacccgccgacctggagaaccactttgtaccgcttgtcaagcgactgtcagcaggagat
tggttcacatccaggacatcagcttgtggtctgtttgctgtatgctatccacgtgtttca
tcgtcagtcaaagcagagcttagacagcacttcagaaaccttggtggagatgatactcca
atggttcgcagggctgctgcagggaaactaggagacttcgcaaaagctgtggagattgag
tacttgaagtcagacttgatccctctgttcactgctctggctcaagatgaacaggattcg
gttcgtctcctggatgtagaggcctgtgtcagcatcgcctccctcctccccccggatgac
gttgagcagtacgtgatgccgactctccgtcaggcggccgatgataaatcctggagggtc
cgctacatggtggccgacaagttcactgagctacaaaaagcagtgggtcctgagattacc
aagactgacctagtcccagcgttctgtagtcttcttaaggactgtgaagccgaagtcagg
gccgcagcctcccacaaggtcaaagatttctgtcagaacctgtccccggatgtgagagag
agtgtcatcatgaccaacatcctgccctgtgtgaaggacttggtctctgatgccaatcag
cacgtcaagtcggcactggcctccgttataatgggactctccccgatcctcggaaaggac
aatacaattgaacatttgttgccactgtttttaacacaactaaaagatgagtgtccagag
gttcgattgaacatcatatccaacttagactgtgtgaatgaggttattggaatcaaacag
ttgtcacagagcttgcttccagccattgtggaactggctgaggacacaaaatggagagtg
cgcctggctatcatagagtacatgccactgttggctggacagttaggggtggactttttt
gatgagaagctgaattccctctgtatgacctggcttgtggaccatgtgtttgctatccgt
gatgcagccactgtcaatctgaagaagctggtggagaagtttggagtggactgggcacag
cagacagtgatccccaaagtgttacagatgtccagggacaccaactacctacacagactc
acctgtctgttctgtatcaatctattgtccgaggcttgtggaccagaaatgaccttgaag
ctgatgttgccaaccattcttaacatggctggagacaatgttcccaatgttagatttaac
gtagccaaatcaatactccgtctagggaaaatgcttgatcaaagtgtggcacagcagcaa
gtaaagcctgtattagacaaactgaaagccgactcggacatagatgtacagtattatgct
ttggaggccattgatgtaattgtcaagtcataa
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