Chryseobacterium rhizoplanae: KB553_10335
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Entry
KB553_10335 CDS
T08349
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
crhi
Chryseobacterium rhizoplanae
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crhi03009
]
KB553_10335 (rimO)
Enzymes [BR:
crhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KB553_10335 (rimO)
Ribosome biogenesis [BR:
crhi03009
]
Prokaryotic type
ribosomal protein modification factors
KB553_10335 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UCA61893
LinkDB
All DBs
Position
complement(2288108..2289409)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLVKEIPDVDQYFGTRDLPVLLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVSEAQKLA
KKGTKELILIAQDLTYYGLDIYKKRALGDLLKELVKVEGVEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLGKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVKEQKFDRLGCFTYSHEENTGAYVLEDDIPQEVKEARVEEIMELQSQ
ISWEKNQEKIGKVFRCIFDRKEGNYFIGRTEYDSPDVDNTVLVSAEDTYISIGEFADVKI
TSAEEFDLYGELV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcggtagggaagaaaaaaatcaatgtagttacacttggatgttccaaa
aatgtatatgactctgaagtattaatgagccagctgaaagccaatgggaaggaagtagtt
catgaagaccgtggagatattgttgtaattaatacctgcggatttatcgataatgcaaaa
gaagaatcaatcaataccattttagattatgtagaagctaaaaataggggagaagtagaa
aaggtcttcgttacaggatgcctttccgagagatataaaccagatttggttaaagaaatt
ccggatgtggaccaatattttgggacaagagatcttcctgtgctgttaaaacatcttggt
gctgattataagcatgaattggtaggggaaagattaactactactccaaagcattatgca
taccttaaaatttcagaaggatgtgacagaccatgttccttctgcgctattcctttgatg
agaggcggccatgtttcaactcctattgaaaagttggtttctgaagctcagaaattagca
aaaaaaggaactaaagaattaattcttattgctcaggatcttacctactatggattggat
atttataaaaaaagagcattaggagatttactgaaagaattggtaaaagtagaaggagta
gaatggattcgtcttcattatgcattcccaagcggctttccggaggatgttttggatatt
atccgtgaagaacctaaagtttgtaattatatagacattcctcttcagcacatcaactct
gatctgttgaaatcaatgaaaagaggaactactcatgagaaaacagatgcacttttaggg
aaattcagagagaaagttcctgatatggcaatcagaacaactcttattgtgggatatccc
ggagaaactgaagaaagattccaggaacttaaagactgggtgaaagaacagaaattcgat
cggttagggtgctttacctattctcatgaagaaaatacaggtgcttatgtattggaagat
gacattccacaggaagtaaaggaagcaagggttgaagaaattatggaattacaatcccag
atttcttgggaaaagaaccaggaaaaaataggaaaggtattcagatgtatcttcgatcgt
aaagaaggaaattattttatcggaagaacagaatatgattctccggacgtagataatacc
gttttggtttctgctgaagatacttatatttctatcggagagttcgcagacgtaaaaatt
acatcagcagaagaattcgatttatatggtgaattagtataa
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