Cylindrospermopsis raciborskii: L3I90_04440
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Entry
L3I90_04440 CDS
T08337
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk00900
Terpenoid backbone biosynthesis
crk01100
Metabolic pathways
crk01110
Biosynthesis of secondary metabolites
Module
crk_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
L3I90_04440
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crk01006
]
L3I90_04440
Enzymes [BR:
crk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
L3I90_04440
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
L3I90_04440
2.5.1.29 geranylgeranyl diphosphate synthase
L3I90_04440
Prenyltransferases [BR:
crk01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
L3I90_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UJS05491
LinkDB
All DBs
Position
complement(1002380..1003309)
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AA seq
309 aa
AA seq
DB search
MVATDNIQKTSQPARFNLYAYLGERQQLCDAALDKSIPLVYPETIYEAMRYSLLAGGKRV
RPILCLATCEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE
DVAILAGDGLLALSFELVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQ
SNISLETLNFIHNHKTAALLEASVVCGGIIAGASPQDIQKLTRYSQNIGLAFQIIDDILD
ITATKEQLGKTAGKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDFYGDKAVPLQEI
AHFIINRNH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaacggataacattcaaaaaacatcacagccagcccggtttaacctctatgcc
tatcttggagaacgacagcagctttgtgatgcagctctggataaatccattccgctagtg
tatccagaaacaatctatgaagccatgcgctattccctcctagctggaggtaagcgtgta
cgtcccattctgtgtcttgccacttgtgaaatgattggtggcactatagaaatggctatg
ccaaccgcttgtgctatggaaatgattcataccatgtccctaattcatgatgatttgcca
gctatggataatgatgattatcgacggggtaagttgacaaatcacaaggtctatggggaa
gacgtagccattttagctggtgatggtctgttggctttgtcctttgaacttgtagccacc
caaacacctcaaaccgtaccacctgagaggactttacgggtaattgccagaatgggtagt
gcttctggggctcctgggttggtcggtggtcaggtggtagatttagcatcggaaggtcag
tcaaatatttcactggaaaccctcaattttatccataaccacaaaacagcagcactatta
gaagcatccgtggtctgtgggggaattatcgctggtgcttctccacaagacatacaaaaa
ttgacacgttactctcaaaatattggtctggcattccaaattatagatgatattctggat
atcactgctaccaaggaacaactcggcaaaaccgctggtaaggatattgaaagtgcaaaa
gtcacctatcctagtttgtggggaattgaagagtcaaggttgaaggcccaagaacttgtg
gaagaagcttgtgcccaattggatttttatggggataaggcagtccctctacaggaaata
gctcattttattattaatcgcaatcactag
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