Cylindrospermopsis raciborskii: L3I90_15020
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Entry
L3I90_15020 CDS
T08337
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk00100
Steroid biosynthesis
crk00909
Sesquiterpenoid and triterpenoid biosynthesis
crk01100
Metabolic pathways
crk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
L3I90_15020
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
L3I90_15020
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crk01006
]
L3I90_15020
Enzymes [BR:
crk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
L3I90_15020
Prenyltransferases [BR:
crk01006
]
Terpene biosynthesis
Squalene/phytoene synthase
L3I90_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
UJS04366
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Position
3396682..3397509
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AA seq
275 aa
AA seq
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MDLRRDALQILKETSRTFYIPISIMPSGLQEAVASAYLCMRAIDEIEDHPTLENHTKGIL
LQSISQTLQAGVDGFAVDAFSMGFKGYEDSLPEVSVRIREWAILAPESIAPRIWDATAAM
ADRMAYWSQINWQIKNEYDLDRYTFGVAGAVGLLLSDLWSWYDGTTTNRMEAIAFGRGLQ
AVNILRNNSEDLTRGVNFFPEGWNHQDLQQYARRHLALADSYTNSLPPGPALQFCQIPLA
LAHGTLDALANGKEKLSRHDVYALIENLINVNAVV
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggatttacgtcgggatgctttacaaattctcaaggaaactagtagaaccttttatatt
ccaattagcattatgccatcaggactacaagaagctgtggcatcagcatacttgtgtatg
cgtgctattgacgagattgaggaccatccaactctggaaaatcatactaaaggaatttta
ctacaaagcattagccaaactctacaagcaggagtagatggttttgcagtagatgctttt
tccatgggatttaagggttatgaagattccttacctgaggtcagtgtcaggattagggaa
tgggcaattttagcaccagaaagcattgcacctcgcatttgggatgcaacagcagctatg
gccgatagaatggcttactggtcacaaataaattggcaaattaagaatgaatacgacctg
gaccgttacacctttggcgttgcaggtgcagtaggtttgttactctcagatttatggtca
tggtatgatggaaccacgactaaccgcatggaagcgatcgcctttggtcgagggttacaa
gcagtaaatatcctacgtaataatagtgaagatttaacccgtggggtaaattttttcccc
gagggttggaatcaccaggatcttcaacagtatgctcgtcgtcatctagctttagcggat
agttatactaatagtcttcctcctggacccgctctacaattctgtcaaattcccctggcc
ttggcccatggtactctggatgcactagctaatggtaaggaaaaactcagtcgtcatgat
gtctatgctctaatcgaaaatctcattaatgtcaatgcagtagtataa
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