Corynebacterium renale: NCTC7448_01808
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Entry
NCTC7448_01808 CDS
T06893
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
crl
Corynebacterium renale
Brite
KEGG Orthology (KO) [BR:
crl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crl03009
]
NCTC7448_01808 (rsmD)
Enzymes [BR:
crl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
NCTC7448_01808 (rsmD)
Ribosome biogenesis [BR:
crl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NCTC7448_01808 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
RsmJ
PrmA
Methyltransf_25
Methyltransf_16
Methyltransf_31
N6_N4_Mtase
DNA_methylase
Methyltr_RsmB-F
MethyltransfD12
N6-adenineMlase
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
SQI25690
LinkDB
All DBs
Position
1:1886795..1887364
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AA seq
189 aa
AA seq
DB search
MARIVSGNARGRTLKVPPEGTRPTSDRAKEGLFSSLQVRFGFNGRTVADLFAGSGALGLE
ALSRGADSVVLVENHKPAVKIIEHNIAKVNMPGARVDEMKVSTWVKSAPREHFDMILADP
PYDLPDEDVTEMVNALRPLLIDGAVVVVERHRESPETAWPADFHPTTQKLKKRTYGIARM
DMAVYEKAE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcgtgtccggcaatgcccgaggacgcaccctcaaagtgccaccggagggg
acccggccaacctctgaccgggctaaggaaggcctcttttcctccctgcaggtccgcttc
ggtttcaatggccgtaccgtcgctgatctcttcgccggttccggggcgttggggctggaa
gccctgtcccggggcgccgattcggtggtgctcgtggaaaaccacaagccagcggtcaaa
attatcgaacacaacattgccaaagtgaatatgcccggcgcccgcgtcgatgagatgaaa
gtctccacgtgggtgaaatccgccccccgcgagcacttcgacatgatcctcgctgaccca
ccctatgacctcccagatgaggacgtcactgagatggtaaacgcgctgcgcccattgctt
atcgacggcgccgtggtcgtcgtcgaacgccaccgcgaatcccccgagaccgcttggccc
gccgacttccacccaaccacccaaaagctgaagaagcgcacctacggcattgcccgcatg
gacatggccgtgtacgagaaagccgaataa
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