Paracrocinitomix mangrovi: K6119_18460
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Entry
K6119_18460 CDS
T07876
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
crm
Paracrocinitomix mangrovi
Brite
KEGG Orthology (KO) [BR:
crm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crm03009
]
K6119_18460 (rimO)
Enzymes [BR:
crm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K6119_18460 (rimO)
Ribosome biogenesis [BR:
crm03009
]
Prokaryotic type
ribosomal protein modification factors
K6119_18460 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
TRAM_2
Radical_SAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UKN01710
LinkDB
All DBs
Position
complement(4142442..4143758)
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AA seq
438 aa
AA seq
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MKTKTLKKNKVNVVTLGCSKNLFDSEVMMAQLKANKFEVEHEAQQDDSEIVIINTCGFID
NAKQESIDTILRYADAKAEGLVDKIYVTGCLSERYKDDLKNEIPEVDGYFGTRDLPRLLK
TLKADYKKELIGERLLTTPSHYAYFKIAEGCDRPCSFCAIPLMRGKHVSTPIDQLVENAK
SLAGQGVKELMLIAQDLTYYGLDIYKKRNLAELLDKLADVNGIDWIRLHYAFPSGFPMDI
LDVMNERENVCNYLDMPLQHGSTNMLKAMKRGITREKTEDLIAQIRDKVPGIALRTTLIS
GFPGETEVDFQEMYDWVEKSRFERLGIFTYSHEENTSAYALEDDVPAEVKQQRADDIMEL
QAGISYELNQDRIGKTYKVLFDKAEGEYFIGRTEFDSPEVDNEVLVKITEENHLRIGDFA
NVKITSADHYDLYGEVVK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaacgcttaaaaaaaacaaagtcaatgtggtgactttgggatgttctaaa
aatctctttgattcagaggtgatgatggcgcaattaaaagccaataaatttgaagtagaa
cacgaagcacaacaagatgattcagaaattgtaatcatcaatacttgtggttttattgat
aatgccaaacaagaatctatagatactatccttagatatgcagatgcaaaagctgaaggt
ttagtagacaaaatctacgttacgggttgtttatctgaacgctataaggatgatttgaaa
aatgaaatccctgaagttgacggatatttcggaaccagagatttaccaaggttattaaag
actttaaaagcagattataaaaaggaattgattggagaaagattgttgacaactccatct
cattacgcttactttaaaattgcagaaggttgtgatagaccttgttctttttgtgctatt
cctttgatgagaggtaagcacgtctctactcctattgatcaattggtggagaatgctaaa
tctttagctggacaaggagttaaagaattgatgttgatcgctcaagatttgacgtattat
ggtttagatatctataaaaaaagaaatctggctgagcttttagacaaactagctgatgtc
aacggcattgattggattagattacattacgcattcccttcaggctttccaatggatatt
ctggatgtaatgaatgaaagagagaatgtatgcaattatttagatatgcctttacaacat
ggttcaactaatatgttgaaagctatgaaaagaggtattactagagaaaaaacagaagat
cttattgcgcaaataagagataaagttccaggaattgctttaagaactactttgatttca
ggatttcctggtgaaactgaggtagactttcaagagatgtatgattgggtagaaaaaagc
cgttttgaaagattgggaatctttacctattcgcatgaagaaaacacttctgcttacgca
ttggaagatgacgttcctgctgaagtgaaacaacaaagagcagatgatatcatggaatta
caggctggtatttcctatgaattgaatcaagacagaattggaaaaacctataaggtgttg
tttgataaagctgaaggagaatactttattggaagaacagaatttgattcacctgaggtg
gataatgaagttttggttaagataacagaagaaaatcatttaagaattggtgattttgcc
aatgtcaagattacttctgctgatcactatgatttgtatggtgaagttgtgaaatag
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