Carnobacterium sp. 17-4: CAR_c06620
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Entry
CAR_c06620 CDS
T01452
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn00900
Terpenoid backbone biosynthesis
crn01100
Metabolic pathways
crn01110
Biosynthesis of secondary metabolites
Module
crn_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CAR_c06620 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crn01006
]
CAR_c06620 (ispA)
Enzymes [BR:
crn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CAR_c06620 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CAR_c06620 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CAR_c06620 (ispA)
Prenyltransferases [BR:
crn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CAR_c06620 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AEB29356
UniProt:
F4BN51
LinkDB
All DBs
Position
672337..673236
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AA seq
299 aa
AA seq
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MNLKSFKDKVIPSFEEEMLGYIGENGIKKAPLHEAMFYSLEAGGKRIRPLLLLATIQSLG
GDIRKGYAVSAALEFIHTYSLIHDDLPAMDNDDLRRGKPTSHIVYGEDTAILAGDALLTQ
AFEIIAVSDASPEKKVKLILALAKSAGPEGMILGQMADIQGETKDLSLEELQFIHRNKTG
ELLKFPIYAACVIADAATEVEEQLMGYAEHIGLAYQIRDDILDVIGNVEEIGKNIGMDAA
HNKSTYPGLLTLEGAKKALNQELTAAKLNLMTVEQISRDSARPVQINLLVEIIDLLVID
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaagtcatttaaagataaagtgattccatcatttgaagaggaaatgctcgga
tatattggggaaaatggcattaaaaaagccccattgcatgaagccatgttttattccttg
gaagctggtggaaaaagaattcgacctttgcttcttttagcaacgattcaatcgttgggc
ggcgatattagaaaaggatatgccgtgagtgctgctttagagtttattcacacgtattcc
ttgattcatgatgatttaccagctatggataatgatgatttgcgtagaggaaaaccgaca
agtcatattgtttatggtgaagatacagcaattttagctggtgatgctttgctaacacaa
gcttttgaaattattgctgtatcagatgcttctccagaaaaaaaagtgaaattaattcta
gcattagcaaaatcagctggtccagaaggtatgattttggggcaaatggcggatatccaa
ggtgaaacaaaagacttaagcttggaagaattgcaatttattcatcgaaacaaaacaggt
gaattgttaaaatttcctatttatgccgcatgtgtgattgctgacgcagcaacagaagta
gaagaacaattgatggggtacgctgaacatatcggattagcttatcaaattcgcgatgac
attttggatgtgatcggaaatgtagaagaaatcggtaaaaatattgggatggatgcagca
cacaataaaagtacttatcctggtttgctaacacttgaaggagctaaaaaagctttgaat
caagagttaacagctgcaaaattaaacttaatgactgtagaacaaattagtcgagactca
gctagaccggtccaaattaatttactggtagaaattattgatcttttagtaatcgattaa
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