Citrobacter rodentium: ROD_37801
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Entry
ROD_37801 CDS
T01145
Symbol
trmA
Name
(GenBank) tRNA (uracil-5)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cro03016
]
ROD_37801 (trmA)
Enzymes [BR:
cro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
ROD_37801 (trmA)
Transfer RNA biogenesis [BR:
cro03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ROD_37801 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_15
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_11
PrmA
Methyltransf_12
DUF3164
DREV
Coq4
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
CBG90484
UniProt:
D2TTI5
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All DBs
Position
3980231..3981331
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AA seq
366 aa
AA seq
DB search
MTPEHLPTEQYDAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLY
HIIFDQQTKSRIRVDSFPAASELINQLMSAMIAGVRNNPVLRQKLFQIDYLTTMSNQAVV
SLLYHKKLDEAWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMI
YRQVENSFTQPNAAMNIQMLEWALDVTRGSKGDLLELYCGNGNFSLALARNFDHVLATEI
AKPSVAAAQYNIAANGIENVQIIRMAAEEFTQAMNGVREFNRLKGVDLKSYQCETIFVDP
PRSGLDSETEKMVQAYPRILYISCNPQTLCKNLETLSQTHKIERLALFDQFPYTHHMECG
VLLTAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaacaccttccgacagaacagtatgacgcgcagctcgccgaaaaagtggtg
cgcttacagagtatgatggcgccgttttctgacctggttccggaagtgttccgctcgccg
gtcagccattaccgtatgcgcgccgagttccgcatctggcacgacggcgatgacctgtac
catattattttcgatcagcagacgaaaagccgcattcgcgtcgacagcttcccggcggcg
agtgagttgattaaccaactgatgagcgcaatgattgcaggcgtgcgcaacaaccctgtt
ctgcggcaaaagctgtttcagattgattacctcaccaccatgagcaaccaggcggtggtg
tcgctgctgtaccataagaagctggacgaggcgtggcggcaggaagcggaagcactgcgt
gacgccctgcgcgcgcagaatctgaacgtgcatctgattggccgggcgacgaagaccaag
atcgaactggatcaggattacatcgacgaacgtctgccggtggcgggtaaagagatgatc
taccgtcaggtagaaaacagcttcacccagccgaatgcggcgatgaatattcagatgctg
gagtgggcgctggatgtcaccagagggtcgaaaggcgatctgctggaactatactgcggc
aacggcaacttctctttagcgctggcgcgtaactttgaccacgtgctggccactgaaatc
gccaagccgtccgtcgccgcggcgcagtacaacattgcggcgaacggcatcgaaaacgtg
cagattattcgcatggcggcagaggaatttactcaggcgatgaatggcgttcgcgagttt
aaccgcctgaagggtgtcgatctgaaaagctatcagtgcgaaaccatttttgtcgatccg
ccgcgcagcgggctggacagcgagacagagaagatggtgcaggcgtacccgcggatttta
tatatctcctgtaacccgcagacgctgtgcaaaaacctggaaacattaagccagacgcat
aagattgaacgtctggcgctgttcgatcagttcccctacacgcaccacatggagtgcggg
gtgctactcaccgcgaagtag
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