Citrobacter rodentium: ROD_39131
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Entry
ROD_39131 CDS
T01145
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
cro
Citrobacter rodentium
Pathway
cro00130
Ubiquinone and other terpenoid-quinone biosynthesis
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
cro01240
Biosynthesis of cofactors
Module
cro_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
ROD_39131 (ubiD)
Enzymes [BR:
cro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
ROD_39131 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
CBG90616
UniProt:
D2TUZ2
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All DBs
Position
complement(4132529..4134022)
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AA seq
497 aa
AA seq
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MDAMKYHDLRDFLTLLEQQGELKRITLEVDPHLEITEIADRTLRAGGPALLFENPKGYSM
PVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM
PTKRLRGAPCQQKVLSGDDVDLTQIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYR
QQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLS
EYAFAGLLRGTKTEVVKCVSNDLEVPASAEIVLEGYLEPGEMAPEGPYGDHTGYYNEVDS
FPVFTVTHITRRDDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG
CSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR
MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIRKDADVTAR
IDAIWDELAIFNNGKGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatgaaatatcacgatttacgcgacttcttgacgctgcttgaacaacagggc
gaactgaaacgcatcacgcttgaagtcgatccgcacctggaaatcaccgaaattgctgac
cgtacgctgcgagctggcggtcctgcgctgctgtttgaaaatccgaaaggctattcaatg
ccggtgttgtgcaatctgttcggcacgccaaaacgcgtggcgatggggatggggcaggag
gacgtctccgcgctgcgggaagtgggtaagctgctggcttttctgaaggagccggagccg
ccaaaaggttttcgcgatctgttcgataaactgccgcagtttaagcaggtgctgaatatg
ccgacgaagcggctgcgtggcgcgccgtgtcagcagaaagtcctctctggcgatgacgtt
gatttaacccagattcccattatgacctgctggccggaagatgccgcgccgctgatcacc
tgggggttaaccgtgacccgcgggccgcacaaagagcggcagaatctggggatttatcgt
caacagttgattggtaaaaataagctcattatgcgctggttgtcccatcgcggcggcgcg
ctggattatcaggagtggtgcgcggcgcaccctggcgaacgcttcccggtttccgtggcg
ctgggcgcggacccggccactattcttggcgccgttacgccggtgccggacaccctctcg
gagtatgcgtttgccggtctgctgcgcggcacgaaaaccgaagtggtgaaatgcgtttct
aacgatctcgaggtgcccgccagcgcggaaatcgtgctggaagggtatcttgaacccggc
gaaatggccccggaaggcccctacggcgaccataccggctattacaatgaagtggacagt
ttcccggttttcaccgtcacgcacatcacccggcgtgacgatgcgatttaccactccact
tataccggacgtccgccggatgagcctgcggtgctcggcgtggcgctgaacgaagtgttc
gtgccgattctgcaaaagcagtttccggaaattgtcgacttctatctgccgccggaaggc
tgctcgtaccgtctggccgtcgtcacgatgaaaaaacagtacgcgggacatgccaaacgg
gtcatgatgggcgtctggtcgtttttacgtcagtttatgtacaccaaatttgttatcgtt
tgcgatgacgacgtcaacgcacgcgactggaacgatgttatctgggcgataaccacccgt
atggacccggcgcgggatacggtgctggtcgaaaacacgcccattgattacctggatttt
gcctctccggtctccgggctgggttcaaaaatggggctggatgccaccaataaatggcca
ggcgaaacccaacgcgagtggggacgaccaatcagaaaagatgccgatgtgacagcgcgt
attgatgcaatctgggatgaactggccatctttaataacggtaagggcgcctga
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