Caenorhabditis remanei (nematode): GCK72_001228
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Entry
GCK72_001228 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crq03016
]
GCK72_001228
Enzymes [BR:
crq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
GCK72_001228
Transfer RNA biogenesis [BR:
crq03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
GCK72_001228
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Gene cluster
GFIT
Motif
Pfam:
TRAM
Motif
Other DBs
NCBI-GeneID:
78773241
NCBI-ProteinID:
XP_053591530
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Position
I:6525725..6526794
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AA seq
222 aa
AA seq
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MIKHVPNIYIATDMILAFPTETLEDFEESMELVRKYKFPSLFINQYYPRSGTPAARLKKI
DTIEARKRTAAMSELFRSYTRFTEDRIGEIHNVLVTEVAADKLHGVGHNKSYEQILVPLE
HCKMGEWIEVRITSVTKFSMISTPTSLSEVTAQHWTDSPNWMYFYPMTFFLLLLVTLYSI
DRFISPGFLEEWLPFLADTETDNDMWMHGPNAGENDDVVFYE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcatgtcccgaatatctacatcgccactgatatgattctcgcattcccgact
gaaacattggaagatttcgaggaaagtatggagttggtcagaaaatataaatttccatca
ctcttcatcaatcagtactacccgagaagcggaacaccggcagcacgattgaaaaagatt
gatacgattgaagcgagaaagagaactgctgcaatgtcagagttgttcagatcatatacc
agattcacggaggatcgaattggagagattcataatgttctggtcacagaagtggcagca
gacaaacttcatggagtcggtcacaacaagagctacgaacaaattcttgttccccttgaa
cactgcaaaatgggagaatggattgaagttcgtatcacttctgtcacgaaattcagtatg
atctcaacaccaacttcgctgtcagaagtaactgctcaacattggacagattctccaaac
tggatgtatttctatccaatgacattcttccttctccttctcgtaactctgtactcaatc
gatcgcttcatttctcctggttttctggaagagtggctcccattcttggcagatacggaa
accgacaatgatatgtggatgcatggaccaaacgctggagagaatgatgatgtcgttttt
tatgaataa
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