Caenorhabditis remanei (nematode): GCK72_005807 Help Entry GCK72_005807      CDS       T09085                                  Name (RefSeq) hypothetical protein   KO K02999   DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] Organism crq  Caenorhabditis remanei (nematode) Pathway crq03020   RNA polymerase Brite KEGG Orthology (KO) [BR:crq00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     GCK72_005807  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:crq03021]     GCK72_005807 Enzymes [BR:crq01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      GCK72_005807 Transcription machinery [BR:crq03021]  Eukaryotic type   RNA polymerase I system    RNA polymerase I     Core subunits      GCK72_005807 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  9797627 NCBI-ProteinID:  XP_053589543 LinkDB All DBs Position II:complement(10317810..10328181) Genome browser AA seq 1725 aa AA seqDB search MDFFVRNGEEPYMQFSNFKLRSYFPHEIDKLSVLKVTQTKTFDEVGHPIAGGLYDPILGP DNNFDMCLTCNQYERHCPGHMGHIQLAVPVFNPLLFQFTYNLLKGSCVHCHRLTCKGDSG SARILLAQLRCFDLGVEHVALDLESILREKIKNCDLLNDEDIDTTMDVCIAQLANKPLSE LTQFKSIPTKNGVQLKKDIITEFLRNHLFKRLQKCPLCKNRNGTLRNDGARSILIDFTGA RKKSKKMSIIGDIGYNEESSPSTDEDEKKEDKHVEVNASVVDLDEGSLELQMKNVRSGEC DKLAWRGAEVREHFRMMFKNDGNLLLKLFPMLVDELNGGDMVCPLDGLFLERILVPPKKF RPIRMFKGAQYEDPQTLNLRKVLEATETISAISLIMKGDKSAQLKELVANRVRGKTINAQ MHDAYLQLQLRANAIFDQDLNRGDRDSIAGIKQILEKKQGLFRMHMMGKRVNFACRSVIT PDPYLDIDEIGIPDIFAKKLTFTEPVNAFNMKEMKELLKKGPHQHPGANFFVEPSGKKTM LGDKPDEKKRRYHLAKTLNAATTESVRQTPKVLRHMKNGDMIMMNRQPSLHKPSIMGHRA RVLTGQRALRMNYAPCKAYNADFDGDEMNGHLVQSHIAQTEVREIANVGSNFLVPKDATP LLGLIQDHVVSGVLLTLRDRFLNKEDFMHLVLSSFAQYSKRIEIPPPTILYPKRLWTGKQ VVTTIVKNCIPEGKPLINLDGKAKTPLSCWTVPGFNQPSFDMSESHVVFRQGELLVGVLD KAHFGATQFGLAHCAFELYGHRCGVQLLSCFSRLFTTYLQYHGFTLGVADILVVKEADGK RKEAVMESRTIGNQVVKTAFGLPDTATPTEIKRTLAATYCNPRGQGTDVKMLDFGMKQGI AKYNDAITKSCVPTGLLRLFPQNALQLMIQSGAKGSAVNAIQISGCLGQIELEGKRMAVT IAGRTLPSFRCFDPSPRAGGYIDQRFLTGMNPQELFFHTMAGREGLIDTAVKTSRSGYLQ RCIIKHLEGIRVHYDSTVRDHDGSVIQFRYGEDGMDTTKATFLNKKTMPFLEDNLEAVTL ASKPEGVNDNDFGVNETEKRYKKITKWKKKASKSEKKSYFSAFTNFSAENAGLDKKRILG MWFELSLEERAEYARGVPKKCPEAVDERFNPTCKLGALPEKMLDEIEGFCTKTREEPNDA LKRTLYWKGMRSLADPGENVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREI LMTASKSIATPSASIAVITGTPRERIDAIKQELDRVYLKQLLKNFSLEEKITLTENQSSR RYHLRIEILAAEKREQGARHLKRAKIMEEIEKRFILRVAQAIKKKYNEITDYQQMSHRTM RQGNAAAGIEFTRAQRSRGIQGPDNGDSSDEEAEGGRDADAAEARLHQRHRDEGADYEGE DEERVEVRERDDEPMDSDTEDLNKEGGGPETEEREKEQMVNSSRIQAVQRLSENISSYTY DVKSNKWCEIVFELPLRNKTKMDVSSIVENEVELFIVHQTPGIERCVETTEQKNGKEVII LQTQGVNLAAFFKHADVLDVNSVYSNDLNLILENYGVEACSKAITTEMNNVFAVYGIEVS KRHLSLTADYMTFTGQIQPFNRGAMSSSSSPLQKMTFETTMAFLREALLQGEEDNVNSPS ARIVMGALPRGGTGSFDLLLNPKMQSEREEHEAERARRRGAKHSY NT seq 5178 nt NT seq  +upstreamnt  +downstreamnt atggacttcttcgtccgaaatggcgaggagccgtatatgcagttttcgaatttcaagctt cgaagctacttcccacatgaaatcgataagctcagtgttctgaaagtcacacagacaaaa acgtttgatgaggtcggtcaccctattgctggcggtctgtatgatcctattcttggtccg gacaataatttcgatatgtgtctgacgtgtaatcagtacgagagacattgcccaggccac atgggacatattcaactagctgttccagttttcaatccacttctctttcaatttacgtac aatcttttgaaaggttcttgtgttcactgccaccgtttgacatgcaaaggagatagcggc agtgcacgcattctactcgcccagttacgttgcttcgatctaggcgtagagcatgtggcg cttgatctcgaatcgattcttcgtgaaaaaatcaaaaattgcgatctgcttaacgatgaa gatatcgataccaccatggacgtttgtattgctcagctggccaataaacctctttcggaa ctgacccaattcaaatctataccgacgaaaaacggtgttcaactgaagaaagacattatc actgagttcctcagaaaccacttattcaaaagacttcaaaagtgtccattatgcaaaaat cgtaatggaactctgagaaacgacggtgctcgttcaattcttatcgatttcactggtgcc cgtaaaaaatccaagaaaatgtctattattggagatattggatacaatgaggaatcatca ccatcaacagatgaagatgaaaaaaaggaagataaacatgtcgaagtaaacgcaagtgtt gttgatttagatgaaggaagtctagagctgcaaatgaaaaacgttagaagtggagagtgt gataaacttgcttggagaggagccgaagtccgagagcatttccgaatgatgtttaagaac gatggaaatctactgctgaaactgtttccgatgcttgtggacgagttgaatggaggagac atggtttgtccattagatggattgttcttagaaagaattttagtgcccccaaagaaattt cgtcctattcgaatgttcaaaggagcccaatatgaagatccacaaactcttaatcttcgc aaagtacttgaagccactgaaacaatctctgctatttcactcatcatgaaaggggacaag agcgctcagctgaaagaactggttgcaaacagagtgcgaggaaaaactatcaacgctcaa atgcacgatgcttatcttcaactacaacttcgtgcaaatgctatttttgatcaagacttg aacagaggagatcgtgacagcatcgctggaatcaagcagattcttgaaaagaaacaggga ttgttcagaatgcacatgatgggaaaacgtgttaactttgcttgtagatcggtcattact ccagatccatatcttgatattgatgaaatcggtattccggatattttcgccaaaaaactc actttcaccgaaccagtgaatgccttcaacatgaaagagatgaaagaactgttgaagaaa ggccctcaccaacatccaggagctaatttcttcgtggagccatctggaaagaagacaatg cttggagataaacccgatgagaagaagagacgatatcatcttgcgaaaacgttgaatgca gcaacaactgaaagtgttcgtcaaacgccaaaagtcttgaggcatatgaagaacggtgat atgattatgatgaatcgtcaaccatctcttcacaaaccatcaattatgggtcatcgagca agagttctcactggacaaagagctcttcgaatgaactacgcgccatgtaaagcttacaat gctgatttcgatggagacgaaatgaatggacatttagtacaatcacatattgcccaaact gaggttcgcgagattgcaaacgtcggaagtaactttttggttcctaaagatgctacaccg cttctcggtctgattcaagatcacgttgtttctggtgtacttctcactcttcgagatcgt ttcttgaataaggaagactttatgcatctcgttctttcttcttttgctcaatattccaaa aggatcgaaatcccaccgccaacaattctctatccaaaacgactctggacaggaaaacaa gttgtgaccactattgtcaaaaattgtattcctgaaggaaagcccctcatcaacttggac ggaaaagcgaaaactccgctcagttgctggactgttcctggattcaatcagccttctttc gacatgagtgaatcgcatgtggtattccggcaaggagaactgctagttggagtcctcgat aaagctcatttcggtgctactcaattcggattagctcattgtgcatttgaactttatgga catcgttgtggagtgcaacttctatcatgtttttcaagactgttcacaacatatttacag tatcacggattcactcttggtgttgctgatattctcgtagtcaaagaagcagatggaaag agaaaagaagctgttatggagtcacgaactattggaaatcaagttgttaaaacagcattt ggccttccggacactgctacgccaactgaaatcaaaagaacacttgctgctacttactgc aatccacgtggacaaggaacagatgttaagatgttggattttggaatgaaacaaggaatc gccaaatacaacgacgcaatcacaaagtcttgtgttccaacaggtcttctacgtcttttc ccacagaatgctcttcagcttatgattcaatctggagccaagggatctgcagtgaatgct attcaaatttctggatgtcttggtcaaattgaattggaaggaaaacgtatggctgttact attgctggtagaactcttccttccttccgatgcttcgatccatcaccaagagctggtggt tatatcgatcaacgtttcttgacaggaatgaatccacaagaacttttcttccatacaatg gctggacgtgaaggtcttattgatactgctgtcaaaacgtctcgttccggatatcttcaa cgttgtatcatcaagcatctcgaaggaattcgcgtgcattacgactcaacagttagagat cacgatggatcagtaattcagttcagatacggagaagatggaatggacaccacaaaagct acattcttgaataagaagacgatgccgttcctcgaagacaatttggaagcagttactctt gcttcgaaaccagagggtgttaatgataacgacttcggagtcaatgaaactgagaaacgg tacaaaaagatcacgaagtggaagaagaaagcatctaagtcggaaaagaagtcctatttc tccgcattcacgaatttttcggctgaaaacgctgggttggacaagaagcgaattttagga atgtggtttgaactgtcgttggaagaacgagccgaatatgccagaggagttccgaaaaaa tgtccagaagctgtcgatgagaggtttaacccaacatgtaaacttggagctcttcctgag aaaatgttggacgaaattgaaggattctgtacgaaaacaagagaagaaccaaatgatgca ctgaagcggacattgtattggaaaggtatgcgatcgctggctgatccgggagagaacgta ggtcttctagccgctcaatcgatcggagagccatctactcaaatgacattgaacactttc catttcgccggaagaggagaaatgaacgttaccctcggaatccctcgccttcgagaaatt ctgatgactgcttcgaaaagcatcgctactccaagtgcttctattgcagtcattactgga acaccccgtgagagaatcgatgcaatcaaacaagagttggatcgtgtctatttaaagcaa ttgctcaaaaatttctctctggaagaaaagatcacactgactgaaaaccaatcttcacgt cgctatcatctccgtatcgaaattttggctgccgaaaaacgagagcaaggcgcacgtcat ttaaagcgagctaaaatcatggaggagattgaaaagagatttattctccgcgttgcacaa gccattaagaaaaagtataatgagattactgattatcagcaaatgtctcatcgtacaatg cgacaaggaaacgctgctgctggaattgagtttactagagcgcagaggtcgcgtggaatc caaggaccagacaatggggattcatcagacgaagaagctgaaggaggtagagatgctgat gctgcagaggcacgtcttcatcagagacatcgtgatgagggagcagattatgaaggagaa gatgaagaacgagttgaagttcgtgagcgcgacgatgagccgatggattcagacacagaa gatttgaacaaagaaggtggaggaccggagaccgaggaaagagaaaaagaacaaatggtg aattcttcaagaattcaggcggtccagcgattatccgaaaacatttcctcttatacttat gatgtgaaatcgaacaagtggtgtgaaattgtattcgagcttccattgagaaataagact aaaatggatgtatcatcgattgttgaaaatgaagtcgaattgtttattgttcatcaaact cctggaattgagcgttgcgttgaaactacagagcagaaaaacggaaaagaggttatcatt ctgcaaactcaaggagtcaatttggctgctttctttaaacatgctgatgttctcgacgtc aattcagtgtactcaaatgatctgaatttgattctcgaaaattatggtgttgaagcgtgc tccaaggctattactactgaaatgaacaatgtgtttgcggtttacggtatcgaagtgtca aaacggcatctttctttaactgccgattacatgacattcactggacaaatccaaccattc aatcgtggagcaatgtcttccagttcatcacctcttcaaaagatgacattcgaaacgacg atggcatttctacgtgaggcactcttgcaaggcgaggaagacaatgtgaactctccgtct gctcgtattgtgatgggtgcacttccacgtggaggaactggatcatttgatcttcttctc aacccaaaaatgcaatcggaacgtgaagagcacgaagccgaacgggctcgaagacgagga gccaaacacagttattag

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