Caenorhabditis remanei (nematode): GCK72_009250
Help
Entry
GCK72_009250 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K02599
Notch 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04330
Notch signaling pathway
crq04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
GCK72_009250
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
GCK72_009250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
Ank_2
Ank
Notch
hEGF
Ank_3
Ank_4
Ank_5
NOD
NODP
EGF_CA
EGF_3
EGF_2
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
9800509
NCBI-ProteinID:
XP_053586865
LinkDB
All DBs
Position
III:5600759..5610741
Genome browser
AA seq
1457 aa
AA seq
DB search
MRRDLSTCLLLLFSIQSLTALHNGSCLGLVCGHNGNCHEGPKNGTQNTYWCRCNEGFYGV
YCERRCDLNCGSNQKCVFNNEIQKTLCVCKDCDQNGLSLLKPNCPSGYGGEKCTISGWCY
PEKCKNGGRCVGSGTDAKCVCPDGFKGEKCVLDVNECEVKQDACGPRSTCMNTNGSYLCV
CPQGFLPPDCLTPGNSTVVEFKPTVCFVDISPEHPNGKSMFCQNGGYCEKALSRCQCPPG
YRGSTCEITPESEAEDPCSSNPCIHGSCSSFAGGFQCLCDDGFSGSYCQDGRNHCVENKC
EAGSKCINDVSSYFCDCPPGRTGQFCEKMDCSAVPGICNHGRCIDNPFSEKSFECQCQPG
WEGELCDSDKNECLSRNMCLNNGTCVNLPGTFRCDCARGFGGIWCDQPVDMCQDVECMNG
GKCLHTSDHSPVCQCRNGFIGKRCEKQCPLGFGGVRCDLRKPTGICSKTGPKCFNGGICS
SGFCVCQPDFTGNQCEISRNEVTSSQNLCQSDPCMNNATCIDVDAHIGYACICQQGFEGD
ICERRKDICLENPCANGGTCHQNRESFSCECPSGFYGERCELEKRFFCTNSSCKNGGVCL
RNGTATKCECSYGYTGNRCEEKINLNIFSNQDAVFRTVCEKRKCWERANDGNCDDDCNFS
ACKFDGGDCSGKRQPFSKCKYGNMCADLFANGQCNQACNNEECLYDGMDCMPAVVRCPAK
IREYCAARFANGICDTECNTNGCGFDAGDCDNKTESAPLKDIRITVQMDPTEFQNNGGNS
LMEISSALRATVRIQRDLEGPLVFEWDGEKEQKRVKMDMKKLSEQQVLSTSIRKVRSAIG
GKGVVMYLEVQENCSHGKCLYKDSQTVVDLISARLAKKGIDSFGVPISEALVSTPRKSGG
ESSGSLNSFVFLTGGCIAVILLIAGIMKVEEIRNRKRRMITAKTWTPPMENEDKNRRNQS
INSSQHSLLDPTAGYYDPKRHRAEFDLASQPHGEYNQFFPQPFVNGNGYMTDYGGSVTPM
LRLPTTTVHQVSSIKVEEETEVLTKLHEQAAGPDPITEQITKESVNVKDPKYKRNVLHFL
AANSTGKQEELIVLEAKQCIAVGGKVNEMDCDENTPLMLAVKARRARLVLYLLKAKADPS
IYNKSERNALHEAVINRDSQIMKYLLTNERIIKDIEELDRNGMTALMIVACKEGDDQLIS
MAKLLLIHGAKIDSDGAGRKDSEIYRGRTALHYAALIGNLPMVEFLVNENANKDKQDEEG
RTPIMLAAKEGHRDTVAYLIQRGASVEVVDALDHTARQLARANHHHDVVELFDNVHLQPQ
PHLDFFNGIDIHHQQIHSQPATSTRKNARPAYQKSAKKAAGRTKKEAVSSSRDSTHLTPP
PSDGSTSSPSPQHFMTATTHTTPTSLHYMSPEYQFDYSSEAFHPQCSALPNNGMGYTASP
MLNEPMMRHAEPAHHYY
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagatctctcaacttgtcttctacttttattttcaattcaatcactcactgct
cttcataatggatcatgtcttggattggtatgcggacacaatggaaattgtcatgaagga
ccaaaaaatggaacacagaacacgtattggtgcagatgcaacgaaggattctacggtgtc
tactgcgagagaagatgcgacttgaattgtggatcaaatcaaaaatgtgtattcaacaat
gagattcagaagacattatgtgtttgcaaagactgcgaccaaaacggattgtctctcttg
aaaccgaattgcccatcaggatacggaggagaaaaatgcacaatttccggttggtgttac
ccagaaaaatgcaagaatggaggacgatgtgttggaagtggaaccgatgcgaaatgtgtc
tgtcccgatggatttaagggagagaaatgtgtattggatgtcaatgaatgtgaagttaaa
caagatgcttgtggtccaagaagcacttgtatgaacacgaacggctcctacctctgcgtc
tgtccccaaggattcctccctccagactgtctcactcctggaaattctactgttgtcgaa
ttcaaaccaaccgtctgtttcgtcgatatctctccagaacacccaaatggaaagagtatg
ttctgccagaacggaggctactgtgagaaggctctatccagatgccaatgtccacctggg
taccgtggttccacgtgtgaaataactcctgaatccgaggcggaagatccctgctcctcg
aatccttgtatccatggatcgtgttcctcatttgccggtggattccaatgtctttgtgac
gatggattcagtggatcatattgccaagacggcagaaatcactgtgtcgagaataaatgt
gaagccggatcgaaatgtatcaatgacgtttcctcttatttctgtgattgtccaccagga
agaaccggtcaattctgtgagaagatggattgtagtgcagtccctggaatctgtaatcat
ggacgatgtatcgataatcctttctctgaaaaatcattcgaatgtcaatgtcaacccgga
tgggaaggagagctgtgtgactcggataaaaacgaatgtctctctcggaacatgtgcctg
aataacggaacatgtgtcaatcttcccggcacatttcgatgtgattgtgcacgtggattc
ggtggaatatggtgtgatcagccagtggatatgtgtcaagatgtagaatgtatgaatggt
ggaaaatgtctgcacacttcggatcactcaccagtatgtcaatgtcggaatggattcatt
ggaaagagatgtgagaagcagtgtccacttggattcggaggtgttcgatgtgatctgcga
aagcccactggaatatgctcgaaaactggtccgaagtgcttcaacgggggcatatgtagt
agtggattctgtgtttgtcaaccagattttactggaaatcagtgtgaaatatcaagaaat
gaagtgacgtcatcacagaatctttgtcaatcggacccatgtatgaacaatgctacgtgt
attgatgtggatgcacacatcggatatgcatgtatctgtcagcaaggatttgaaggagat
atctgcgagaggcgtaaagatatttgcctggagaacccttgtgccaatggaggaacttgc
catcagaatcgtgaatccttctcctgtgaatgcccatcaggattctatggggaacgatgt
gaattggagaagagattcttctgtaccaatagttcatgcaagaatggtggagtctgcctc
cgaaatggcacagctacaaaatgtgaatgttcatatggatacactggaaacagatgtgag
gagaagatcaatttaaatatattcagtaatcaggatgccgtcttccgtactgtatgcgaa
aaacggaaatgttgggaacgtgccaacgatggcaactgtgatgatgattgcaacttctcc
gcatgcaaattcgatggtggagactgttctggaaaacgacaaccgttctcgaaatgcaaa
tatggaaacatgtgtgccgatctcttcgcgaatggacagtgtaatcaagcttgtaataat
gaagagtgtctgtatgatggaatggattgtatgccagctgtggtcagatgtccggccaaa
attcgagagtattgtgcagcaagatttgcgaatggaatatgtgatacggagtgtaataca
aatggatgtggattcgatgcaggagattgtgataacaagacagagtccgccccactcaaa
gatattcgaattactgtacaaatggatccaacggaattccagaataacggaggaaactct
ttgatggagatcagttcagcactccgtgcaactgtcagaatccaaagagatctagaagga
ccattggtatttgaatgggacggtgagaaagagcagaagagagtgaagatggacatgaag
aagctcagtgagcaacaagtgctctctacttcaatccgaaaagtcagaagtgctatcgga
ggaaaaggagttgttatgtatcttgaagtccaagaaaactgttctcatggaaaatgtctg
tataaggattcacagacagttgtcgacttgatatccgccagactcgccaagaaaggaatc
gactctttcggtgtccccatctcagaagctctcgtatccacacctcggaaatcaggagga
gaaagttcgggatcgttgaatagttttgtatttcttactggaggatgcattgcagtgatt
ttgttgattgctggaataatgaaagtggaagaaattagaaacagaaaacgacgaatgata
actgctaaaacatggactccaccaatggaaaatgaggataagaaccgaagaaatcaatcg
attaactccagtcaacattctctattagaccccactgcaggatattatgatccgaagaga
catcgagcagaatttgatttggcttcacaaccgcacggagaatataaccaattctttcct
caaccgtttgttaatggaaatggatatatgacagattatggaggctctgtgacacccatg
ctcagattacctactactacagtacatcaagtgtcatcaattaaagtagaagaagagaca
gaagtactcacaaaactacacgaacaagctgctggaccagacccaatcactgaacaaatc
actaaagaatcagtgaacgtcaaggatccgaaatacaagagaaatgttcttcatttctta
gctgcgaattcaactggaaaacaagaagaactgattgtactggaagcgaaacaatgcatt
gctgtaggcggaaaagtgaatgaaatggattgtgatgagaatactccgctgatgttggca
gttaaagcaagacgagctagattggttctctacttacttaaggccaaagctgacccttcc
atctacaacaaatcggaacgaaacgcgctccacgaggccgtaatcaacagagactcccaa
attatgaaatatctgttgacaaatgaacggatcatcaaagatattgaagagttggatcga
aatggaatgactgcattaatgattgttgcatgtaaagaaggagatgatcagctgatttca
atggcaaaattgttgcttattcacggagcgaaaattgattcggatggagcagggcgaaag
gattcggagatttacaggggaagaactgcactccattatgcagcacttattggaaatctt
ccgatggttgagtttcttgttaatgaaaatgcgaataaagacaagcaggatgaagaagga
cgtactccgattatgttggctgcaaaagaagggcacagagatactgtagcatatctgata
caacgaggagcaagtgtggaggttgttgatgcattggaccatacagcccgtcaacttgct
cgtgccaaccatcaccacgacgtcgtcgaactattcgataacgttcatcttcaacctcaa
ccgcacctagatttcttcaatggaatagacattcatcatcaacaaatccattcgcaacca
gccacttcaactcgaaagaatgcgcgtcccgcttatcaaaaatctgccaaaaaagcagcg
ggacgaaccaagaaagaagcagtcagttcttctcgagattcgactcatttgacaccacca
ccgtccgatggatccacgtcatcaccgtctccacaacactttatgacggcgacaacccac
acaacaccgacgagtttacattatatgagtcctgaatatcaatttgattatagttcggaa
gctttccatccacaatgcagtgcacttccgaataatggaatgggatacactgcgtctcca
atgctgaatgaaccaatgatgcgacacgcggaaccagctcatcattattattaa
DBGET
integrated database retrieval system