Caenorhabditis remanei (nematode): GCK72_010541
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Entry
GCK72_010541 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03015
mRNA surveillance pathway
crq04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCK72_010541
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GCK72_010541
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crq01009
]
GCK72_010541
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_010541
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_010541
Protein phosphatases and associated proteins [BR:
crq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
GCK72_010541
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
GCK72_010541
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
GCK72_010541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Adaptin_N
PDS5
Cnd1
CLASP_N
Htt_N-HEAT_1
Ribosomal_L1
Motif
Other DBs
NCBI-GeneID:
9825812
NCBI-ProteinID:
XP_053587497
LinkDB
All DBs
Position
III:10424070..10426124
Genome browser
AA seq
590 aa
AA seq
DB search
MSAVEETADDSLYPIAVLIDELRNEDVTLRLNSIRKLSTIALALGVERTRNELIQFLTDT
IYDEDEVLLVLAEQLGNFTPLVGGPDHVHCLLSPLENLATVEETVVRDKAVESLRKIADK
HSSASLEEHFVPMLRRLATGDWFTSRTSACGLFSVVYPRVSPAIKSELKSMFRTLCRDDT
PMVRRAAAAKLGEFAKVFEKTTVVEGLHSSLTDLHVDEQDSVRLLTVESAIAFGTLLDKA
NKKKLVEPILIELFDDKSWRVRYMVAEKLIEIQNVLGEDMDANHLVALYTNLLKDPEGEV
RCAATQRLQEFAVNLPEDKRQNIICSQLLAVAKELVTDGNQLVKSELAGVIMGLAPLIGK
EQTVSELLPLYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAEDGKWR
VRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHVFSIREASTLIMKELTQKFGGQWA
STNIVPKMQKLQKDTNYLQRMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVEDDVPNVRF
NAAKSLKRIGKNLTASTLTSEVKPLLEKLGKDSDFDVRYFAEEARNGLGL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtcgaagaaaccgcggacgactcactttacccgatcgccgttcttatcgac
gaacttcgcaatgaagatgtcactctccgtctcaacagcatccggaagttgtctacaatc
gctttggctctcggtgttgagcgtactcgcaacgagcttattcaatttttgaccgacact
atctacgacgaggatgaggttcttcttgttcttgctgaacaacttggaaacttcactcca
ttagttggaggaccggaccacgttcattgtcttctttctccactcgagaacttggctact
gttgaggaaacagtcgttcgtgataaggccgtggaaagtctccgcaagattgctgataag
cacagctcagcttcattagaagagcacttcgtcccaatgctcagacgtcttgccactgga
gattggttcacttctcgtacttcggcatgcgggctcttctctgtcgtttatccacgtgtt
agtccggcaatcaagtcggaactaaaaagcatgttccgtactctttgccgcgatgatact
ccgatggtccgtcgtgctgcggccgcaaagctaggagagtttgccaaggtcttcgagaaa
actacagttgtcgaaggacttcattcaagtctcactgatcttcacgttgatgaacaagat
tcggtccgtttgctcactgtagagtcagcaattgcttttggaacccttcttgataaggct
aacaagaaaaaactagtcgagccgattcttatcgagttgttcgacgacaagtcctggaga
gttcgttacatggttgccgagaagctcattgagatccaaaatgttctcggagaggacatg
gatgctaatcatcttgttgctttgtacaccaacctcctcaaagatccagaaggggaagtt
agatgcgctgcaactcaacgtcttcaagagttcgccgttaatttgccagaggacaagcgc
caaaatatcatttgctctcagcttctcgcagttgccaaagaactcgtcacagacggtaat
caactcgttaagtcagaactcgccggcgtcataatgggacttgccccattaatcggcaag
gaacaaactgtttccgaacttctcccactgtacatgcaactcctcaacgatcaaacccca
gaagtccgcctaaacatcatctccagtttggataaagtgaacgaggtgattggagccgct
caattgtcgacttcactactcccagcaattgtcggattggctgaagacggaaagtggaga
gtacgacttgcaatcgttcaattcatgccacttcttgcatctcaactaggacaagagttc
ttcgatgagaaactgttgcccctctgcttgaattggcttactgatcacgttttctcaatc
cgtgaggcttctactctcataatgaaagagttgacgcaaaagtttggaggacaatgggct
agtacaaatatcgttccaaaaatgcaaaaacttcagaaggataccaactatttgcaaaga
atgacttgcctcttctgcctgaacacactcagtgaggcaatgacacaggaacagattctc
aaagagataatgccaattgtgaaagatcttgtggaagacgatgttccaaatgtcagattc
aatgcggccaaaagtttgaagaggatcggaaagaatctgacagccagcaccctgacatcc
gaagtgaaaccactcctcgagaagcttggaaaggactccgattttgatgttcgatacttt
gcagaggaagccagaaacggtctcggcttgtaa
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