Caenorhabditis remanei (nematode): GCK72_016664
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Entry
GCK72_016664 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00052
Galactose metabolism
crq00511
Other glycan degradation
crq00531
Glycosaminoglycan degradation
crq00600
Sphingolipid metabolism
crq00604
Glycosphingolipid biosynthesis - ganglio series
crq01100
Metabolic pathways
crq04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
GCK72_016664
09103 Lipid metabolism
00600 Sphingolipid metabolism
GCK72_016664
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
GCK72_016664
00604 Glycosphingolipid biosynthesis - ganglio series
GCK72_016664
00511 Other glycan degradation
GCK72_016664
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GCK72_016664
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_016664
Enzymes [BR:
crq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
GCK72_016664
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_016664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
9797539
NCBI-ProteinID:
XP_053580531
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All DBs
Position
V:1445088..1451078
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AA seq
654 aa
AA seq
DB search
MKLWILILLNLLVAESVVRTSYGNWSLEKLGDRNSPSFLIDEPNRQFLLDGLPFRYISGS
IHYFRIPRERWDERLQKVRALGFNAIQYYIPWNTHELEEGVHDFSGILDFAEFSSLAFHK
YNLWTILRIGPYICGEWENGGLPAWLLTKNVTKQRSSDPVFTREVEKWFETLLPRVKPLL
RKNGGPVLMLQIENEYGSYDACDKQYLRFLRDLTRAHVGDDVLLFTTDGSAENLLKCGTV
EGVFPTIDFGPTDNLKEIQSNFDLQRKFAPNAPLVNSEYYPGWLVLWGQKRQDLPSPQTI
INGAQFIYSLGASINFYMIHGGTNFGFWNGAEVEAPCITSYDYDAPISEAGDVTTKYLEI
RKWVKGLKDWSTPPQDVPGNSPKSRFGKIKMRLAHSTEKLNSFIDKEFSDPGDCVDSEKP
MSFEALKHPLGLVAYQAKISTCGNLTIPSFGDFIYVYLNGKYIDTLTRRYYNVSSHSVML
DGCQNDGEDRLFLLVENQGRKTFETINDPKGILSEVYINNAPIHFWTQCGIKLPLQNADN
FYLRKTKKTIQRKKFLPNQKQGVFVGVLPVEAPADTWLDTTGWGKGIAVVNGRNLGRYWP
TEGPQMTLYVPREFLKIGENLVMMVELEGAGDACTSTNACVADFIDHPVFHFEQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatggattctgatacttctgaatttgctagtagctgaaagtgttgtccgaacg
agttatgggaattggagcttggaaaaactcggcgacagaaactcgccgtcatttctaatc
gatgaaccgaaccgtcaattccttctggacggtcttccattccgttacatctccggatca
atccactactttcgaattccacgtgaacgatgggatgagcgacttcagaaggttcgagca
ctcggcttcaacgctattcaatattatattccgtggaatacgcacgagttggaggaggga
gtccatgacttttcgggaatcctcgatttcgccgagttctcgtctctggcattccacaag
tacaatctttggactatcctaagaatcggaccgtatatttgtggtgaatgggagaacgga
ggtcttccagcatggcttctcaccaaaaatgtcaccaaacagagaagcagcgatccggtt
ttcacccgtgaagtggagaaatggttcgagacgctgctgccacgtgtgaaaccacttctc
cgtaagaacggagggcccgttctgatgcttcaaattgagaacgagtacggtagttatgac
gcgtgtgacaagcagtatctccggtttctgagggatttgacgagagctcatgttggcgat
gatgtgttgctgtttacgaccgatggttccgcggaaaaccttctaaaatgtggtaccgtc
gagggcgtattcccaacaatcgacttcggcccaaccgacaatcttaaagaaattcaatca
aatttcgatctccaacgaaaattcgcgcccaacgcaccactcgtcaattccgaatactac
cccggttggctagtcctctggggtcaaaagcgtcaagatctcccgtcccctcaaacaatt
atcaatggagcgcaattcatatactcccttggagccagtatcaacttctacatgattcac
ggaggcactaatttcggattctggaatggtgcagaggtggaggcaccatgcatcacctcc
tatgactacgatgctccgataagtgaggccggagatgttacaaccaaatatttggagata
aggaaatgggtgaagggattgaaggattggtcgacacctccacaagatgttccaggaaat
tcaccaaaatcacgcttcggaaaaatcaaaatgcgactggcccactccactgaaaaactg
aatagtttcatcgataaggagttttcggatccaggagattgtgtggattcggagaagccg
atgagtttcgaggcgctcaagcatccgttgggtttggtcgcttatcaggcgaaaatctcc
acatgcggcaacctgacaatcccatcattcggagacttcatctatgtatatctcaatgga
aaatatattgacactttgacccgccgatattacaatgtgagcagccactcggtgatgctc
gacgggtgccaaaatgatggagaggatcgactcttcttgttggtcgaaaaccaaggaaga
aaaacgtttgagacgattaatgatcccaagggaatcctctccgaagtctacatcaacaat
gctcctatccacttctggacccaatgtggtatcaagcttccgttacaaaacgccgacaat
ttctacctccggaaaaccaagaaaaccattcaacggaaaaagttcctacccaatcagaag
caaggcgtcttcgttggcgtgcttccagtcgaggctcccgccgacacttggctagacacc
accggatggggtaagggaatcgccgtagtgaatggaagaaatcttggaagatactggcca
acagaggggccacaaatgacgttgtacgtgcctcgcgaattcttgaaaatcggagagaat
ctggtgatgatggtggagttggagggagctggcgacgcgtgtaccagtacgaatgcgtgt
gtcgccgattttatcgatcatcccgtttttcattttgagcagtga
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