Caenorhabditis remanei (nematode): GCK72_023090
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Entry
GCK72_023090 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03022
Basal transcription factors
crq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCK72_023090
09124 Replication and repair
03420 Nucleotide excision repair
GCK72_023090
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crq01001
]
GCK72_023090
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_023090
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_023090
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_023090
Enzymes [BR:
crq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
GCK72_023090
2.7.11.23 [RNA-polymerase]-subunit kinase
GCK72_023090
Protein kinases [BR:
crq01001
]
Serine/threonine kinases: CMGC group
CDK family
GCK72_023090
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCK72_023090
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
GCK72_023090
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCK72_023090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
9818429
NCBI-ProteinID:
XP_003103394
UniProt:
E3MKL3
LinkDB
All DBs
Position
X:complement(5719433..5721583)
Genome browser
AA seq
318 aa
AA seq
DB search
MSSGYECIKLLGEGQYSHVYMARHVESSTIVALKKMKLELRKIDNENILRSALQEIRVLK
TTDHKNIIKYFGKVPDCTVPEFVFEYMDTDLFNLINKCLTPFSPHVSKNIISQLLIGVEY
LHTNLILHRDLKPANLLLNTAGRLKIADFGLSWSQNTSQKTLAYEVVTLWYRAPELLFHT
SSYKGEIDIWSIGCILAEMITKKPVFPGTSEKDQLRRIFNVLGVPTTEAWPTMTELRGYK
NIVTDTQPPGLPSMFPNATLDVISFLEKCWVMDPSQRASCQQLLKHEYFTTSPLSCADEI
LGSLVDRLKKAKSQAPTK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggttacgaatgtataaagttgcttggtgaagggcaatattcccacgtttac
atggcaagacatgttgagagcagcacaatagttgctttgaaaaagatgaaactggagctc
cgtaagattgacaatgagaacattcttcggtcagcacttcaagagatccgagttctcaag
actacagaccataaaaatatcattaagtactttggtaaagttcccgactgcaccgttccg
gagtttgtattcgaatacatggatacggatctcttcaatcttatcaataagtgtttgact
ccgttcagtcctcatgttagcaagaacatcatatcgcaactcttgattggtgtcgaatat
ttgcatacaaacttgattttgcatagggacttgaaacctgccaatttgcttctgaacact
gccggacgtcttaagattgcggatttcggactttcttggtcgcagaatacaagtcagaaa
actcttgcttatgaggttgtcactctctggtatcgtgctccggaactactctttcatact
tcgtcatataaaggtgaaattgatatttggtcaattggatgtatcttggctgaaatgata
accaaaaaaccagtatttcccggtacgagcgaaaaagatcaacttcggagaatattcaat
gttctcggagttccaacgactgaggcatggccaacaatgactgaactgagaggatacaaa
aatatcgtaactgacactcaaccacctggattgccatccatgttcccgaacgccactctt
gacgtcatcagtttccttgagaagtgctgggttatggatccatctcagcgagcatcctgc
caacaacttctcaaacatgaatacttcaccacttccccattgagttgtgcagatgagatt
ttgggcagtcttgtagatagactcaaaaaggcaaaatctcaagcccccaccaaatag
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