Caenorhabditis remanei (nematode): GCK72_023982
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Entry
GCK72_023982 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00240
Pyrimidine metabolism
crq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GCK72_023982
Enzymes [BR:
crq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
GCK72_023982
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
9824758
NCBI-ProteinID:
XP_053579230
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All DBs
Position
X:10115423..10117312
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AA seq
366 aa
AA seq
DB search
MCTRFFGQKRAFSKFLQISSQVKEALANGEGVVALESTVITHGLPYPHNLSTAKSLEQKV
RSSGSHPATIALFDGKIHVGLDDEKLEKLASSKTAVKVSTRDIAKTLIRKEVGGTTVAST
MKIAHAAGISVFATGGIGGVHRGADQTFDISADLQELSKTPVCVVCSGVKSILDIPKTVE
YLETHSVNCAVYGIQNDFPSFFTQKSGSRAQFSTEKLEEVVQLLKTSKSLGLPYGTILAC
PIPEKYAADGDVIQKAIDQAVREAIEQKIASQSVTPFILSRVNELTQGASMKTNIALLEN
NASIAGRLAAKLVDRRPITVTHSQPSTSSPRKPKVVSIGAAIVDFEAITTEYLKGFKFRH
NLEIKE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactcgttttttcggtcagaaacgtgcattttctaaatttcttcaaatttcttct
caagtgaaggaggcattagcaaatggagaaggtgtggttgctcttgaaagtactgtaatc
actcatggattgccgtatccacataatttgagtactgcaaaaagtttggaacagaaagtc
cgatcttctggcagtcatccagctacaatcgcattgttcgatggaaaaattcatgtagga
ttggatgacgaaaaattggaaaaacttgcatcaagcaagactgcagtgaaagtttccact
agggatattgcaaaaactctaattaggaaagaagtcggtggaacaactgttgcatcaacc
atgaaaatcgcacacgctgctggaattagtgtttttgcaactggtggaattggtggtgtc
catcgaggagctgatcaaacattcgatatctctgcggatcttcaggaactttccaagact
cctgtctgtgtagtgtgctccggcgtaaaaagtattctagacattccaaaaaccgttgaa
tacctggaaactcattctgtgaactgtgcggtatacggaatacaaaacgattttcctagt
tttttcactcaaaaatcgggaagcagagcgcagttcagtacagaaaaattggaagaagtt
gtgcaattgttgaaaacatcgaaatctcttgggctaccatatggtactatcttggcttgt
ccgatacccgagaaatatgctgcagatggtgatgtgattcaaaaagcaatagatcaagct
gtacgagaagccatagaacaaaaaattgcatcccaaagcgtaaccccattcattctatcc
cgggttaacgaactcacacaaggagcttctatgaaaacaaatattgcacttctggaaaac
aatgcgtcaattgcgggaagattagctgccaaactagtggatagaagaccaattacagtc
actcattctcaaccttctacatcttctccaagaaaaccaaaagtggtatctatcggagca
gctatcgttgattttgaagcgatcacgaccgagtatttgaaggggttcaagttccgccac
aaccttgaaataaaggaatga
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