Chlorocebus sabaeus (green monkey): 103215061
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Entry
103215061 CDS
T04361
Symbol
PRDM9
Name
(RefSeq) PR/SET domain 9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab00310
Lysine degradation
csab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103215061 (PRDM9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csab03000
]
103215061 (PRDM9)
03036 Chromosome and associated proteins [BR:
csab03036
]
103215061 (PRDM9)
Enzymes [BR:
csab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
103215061 (PRDM9)
Transcription factors [BR:
csab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103215061 (PRDM9)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
103215061 (PRDM9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103215061 (PRDM9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SSXRD
zf-C2H2_5
SET
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
103215061
NCBI-ProteinID:
XP_007959454
Ensembl:
ENSCSAG00000017229
LinkDB
All DBs
Position
4:22902119..22922193
Genome browser
AA seq
601 aa
AA seq
DB search
MPKASFNNESSLKEVSGTANLLNTSGSEQAQKPVSPPGEARTSGRHSRLKLELRKKETEG
KMYSLRERKGHAYKEVSEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRS
ALSLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYEGRITEDEEAANNGYSWLITKG
RNCYEYVDGKDKSWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYG
DEYGQELGIKWGSKWKKELMAGRGCSGSSAQSCFSFHVRENGGQGEGAEHGEPKPEIHPC
PSCCLAFSSQKFLSQHVERNHSTQNFPGPSARRLLQPENLCSGDQNQEQQYSDPRSCNDK
TKGQEIKERSKLLNKRTWQKEISRAFSSPPKGQMGSSRVGERMMEEQSRTGQKVNPENTG
KLFVGVGISRIAKVKYGECGQGFSDKSDVVIHQRTHTGEKPYLCRECGRGFSQKSSLSYH
QRTHTGEKPYLCRECGRGFSWKSSLCYHQRTHTGEKPYLCRECGRGFSQKSTLCYHQRTH
TGEKPYICRECGRGFSQKSTLCYHQRTHTGEKLYICRECGRGFSRKSSLCYHRRTHTGEK
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggcatcattcaataatgaatctagtttgaaagaagtatcaggaacagcaaat
ttactgaatacaagtggctcagagcaggctcagaaaccagtgtcccctcctggagaagca
aggacctctggacggcactctagactaaaactggaacttaggaagaaggagactgaagga
aagatgtatagcctgcgagaaaggaagggtcatgcatacaaagaggtcagcgagccacag
gatgatgactacctctattgtgagatgtgtcagaacttcttcattgacagttgtgctgct
catgggccccctacatttgtaaaggacagtgcagtggacaaggggcatcccaaccgttca
gccctgagtctgcccccggggctgagaattgggccatcaggcatccctcaggctgggctt
ggagtatggaacgaggcatctgatctgccgctgggtctgcacttcggcccctatgagggc
cgaattacagaggacgaagaggcagccaacaatggatactcctggctgatcaccaagggg
agaaactgctatgagtatgtggatggaaaagataaatcctgggccaactggatgaggtat
gtgaactgtgcccgggatgatgaagagcagaacctggtggccttccagtaccacaggcag
atcttctatagaacctgccgagtcattaggccaggctgtgaactgctggtctggtatggg
gatgagtatggccaggaactgggcatcaaatggggcagcaagtggaagaaagagctcatg
gcagggagaggctgcagtgggtcatctgctcagagctgcttcagtttccacgtgagagag
aatggtgggcagggtgaaggtgcggaacatggagaaccaaagccagagatccatccatgt
ccctcatgctgtctggccttttcaagtcagaaatttctcagtcaacacgtggaacgcaat
cactccactcagaacttcccaggaccatctgcaagaagactcctccaaccagagaatctc
tgctcaggggatcagaatcaggagcagcaatattctgatccacgcagctgtaatgacaaa
acgaaaggtcaagagatcaaagaaaggtccaaactcttgaataaaaggacatggcagaag
gagatttcaagggccttttctagcccacccaaaggacagatggggagctctagagtggga
gaaagaatgatggaagaacagtccagaacaggccagaaagtgaatccagagaacacaggc
aaattatttgtgggagtaggaatctcaagaattgcaaaagtcaagtatggagagtgtggg
caaggtttcagtgataaatcagatgttgttatacaccaaaggacacacacaggggagaag
ccctacctctgcagggagtgtgggcggggctttagccagaagtcaagcctcagctatcat
cagaggacacacacaggggagaagccctacctctgcagggagtgtgggcggggctttagc
tggaagtcaagcctctgctatcaccagaggacacacacaggggagaagccctacctctgc
agggagtgtgggcggggctttagccagaagtcaaccctctgctatcaccagaggacacac
acaggggagaagccctacatctgcagggagtgtgggcggggctttagccagaagtcaacc
ctctgctatcaccagaggacacacacaggggagaagctctacatctgcagggagtgtggg
cggggctttagccggaagtcaagcctctgctatcaccggaggacacacacaggggagaag
ccctag
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integrated database retrieval system
