Chlorocebus sabaeus (green monkey): 103242561 Help Entry 103242561         CDS       T04361                                  Symbol POLR2A Name (RefSeq) RNA polymerase II subunit A   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism csab  Chlorocebus sabaeus (green monkey) Pathway csab03020   RNA polymerase csab03420   Nucleotide excision repair csab05016   Huntington disease Brite KEGG Orthology (KO) [BR:csab00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     103242561 (POLR2A)   09124 Replication and repair    03420 Nucleotide excision repair     103242561 (POLR2A)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     103242561 (POLR2A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csab03021]     103242561 (POLR2A)    03400 DNA repair and recombination proteins [BR:csab03400]     103242561 (POLR2A) Enzymes [BR:csab01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      103242561 (POLR2A) Transcription machinery [BR:csab03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      103242561 (POLR2A) DNA repair and recombination proteins [BR:csab03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       103242561 (POLR2A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_R RNA_pol_Rpb1_4 RNA_pol_Rpb1_7 Motif Other DBs NCBI-GeneID:  103242561 NCBI-ProteinID:  XP_008008898 Ensembl:  ENSCSAG00000011644 LinkDB All DBs Position 16:6860487..6889054 Genome browser AA seq 1800 aa AA seqDB search MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD SNNPKIKDILSKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI LEVRAGEETRGCRVLTSLSLQEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMH LPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLG IEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKC SFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNI PGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSA ASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS PEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN NT seq 5403 nt NT seq  +upstreamnt  +downstreamnt atgcacgggggtggccccccttcgggggacagcgcatgcccgctgcgcaccatcaagaga gtccagttcggagtcctgagtccggatgaactgaagcgaatgtctgtgacggagggtggc atcaaatacccagagacgactgagggaggccgccccaagcttggggggttgatggacccg aggcagggggtgattgagcggactggccgctgccagacatgcgcaggaaacatgacagag tgtcctggccactttggccacattgaactggccaagcctgtgtttcacgtgggcttcctg gtgaagacaatgaaggttttgcgctgtgtctgcttcttctgctccaaactgcttgtggac tctaacaacccaaagatcaaggacatcctgtctaagtccaagggacagcccaagaagcgg ctcacacatgtctatgacctttgcaagggcaaaaacatctgcgagggtggggaggagatg gataacaagtttggtgtggaacaacctgagggtgacgaggatctgaccaaagaaaagggc catggtggctgtgggcggtaccagcccaggatccggcgttccggcctagagctgtatgcg gaatggaagcacgttaatgaggactctcaggagaagaagatcctgctgagtccagagcga gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagccc cgctatgcacgaccagagtggatgattgtcacagtgctgcctgtgcccccactctccgtg cggcctgctgttgtgatgcagggctctgcccgtaaccaggatgacctgactcacaaactg gctgacattgtgaagatcaacaatcagctgcggcgcaatgagcagaacggcgcagcggcc catgtcatcgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat gagctgcctggcttgccccgtgccatgcagaagtctgggcgtcccctcaagtccctgaaa cagcggttgaagggcaaggaaggccgggtgcgagggaacctgatgggcaaacgagtggac ttctcggcccgcactgtcatcacccccgaccccaacctctccattgaccaggtcggcgtg ccccgctccattgccgccaacatgacctttgcggagattgtcacccctttcaacattgac agacttcaagaactagtgcgcagggggaacagccagtacccaggggccaagtacatcatc cgagacaatggcgatcgcattgacttgcgtttccaccccaagcccagtgaccttcacctg cagaccggctataaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg cagccaactctgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct acctttcgcttgaatctgagtgtgacaactccgtacaatgcagactttgatggggatgag atgaacttgcacctgccgcagtctctggagacgcgggcagagatccaggagctggccatg gttcctcgcatgattgtcaccccccagagcaaccggcctgtcatgggtatcgtgcaggac acactcacagcagtgcgcaaattcaccaagagagacgtcttcctggagcggggtgaagtg atgaacctcctgatgttcctgtcaacgtgggacgggaaggtgccacagccggccatcctg aagccccggcccctgtggacaggcaagcagatcttctccctcatcatacctggtcacatc aattgtatccgtacccacagcacccatcccgatgatgaagacagtggcccttacaagcac atctctcctggggacactaaggtggtggtggagaacggggagctgatcatgggcatcctg tgtaagaagtctctgggcacgtcagctggctccctggtccacatatcctacctagagatg ggccatgacatcactcgcctcttctactccaacattcagaccgtcattaacaactggctc ctcatcgagggtcataccattggcattggggactccattgctgattctaagacttaccag gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcattgagaaggca cacaacaacgagctggagcccaccccggggaacactctgcggcagaccttcgagaatcag gtgaaccgcattcttaacgatgcccgagacaagactggctcctctgctcagaaatccctg tctgaatacaacaacttcaagtctatggtcgtgtctggagctaaaggttccaagattaac atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaaacggattccattt ggcttcaagcaccggactctgcctcacttcatcaaggatgactatgggcccgagagccgt ggctttgtggagaactcctacctagccggcctcacccccaccgagttctttttccatgcc atggggggtcgtgaggggctcattgacacggctgtcaagactgctgagactggatacatc cagcggcgactgatcaagtccatggagtcagtgatggtgaagtacgatgcgactgtgcgg aactccatcaaccaggtggtgcagctgcgctacggcgaagacggcctggcaggcgagagc gttgagttccagaacctggctacgctgaaaccttccaacaaggcttttgagaagaagttc cgctttgattataccaatgagagggccctgcggcgcactctgcaggaggacctggtgaag gacgtgctgagcaacgcacacatacagaacgagttggagcgggaatttgagcggatgcgg gaggatcgggaggtgctcagggtcatcttcccaactggagacagcaaggttgtcctcccc tgtaacctgctacggatgatctggaacgctcagaaaatcttccacatcaacccacgcctt ccctccgacctgcaccccatcaaagtggtggagggagtcaaggaattgagcaagaagctg gtgattgtgaatggggatgacccactaagtcggcaggcccaggaaaatgccacgctgctc ttcaacatccacctgcggtccacgttgtgttcccgccgcatggcggaggagtttcggctc agtggggaggccttcgactggctgcttggggagattgagtccaagttcaaccaagctatt ttggaggtgagagctggggaagagaccagaggatgccgagtgctgacctcactctcgctg caggaggaagaggtggtggataagatggatgatgatgtcttcctgcgctgcattgagtcc aacatgctgacagatatgaccctgcagggcatcgagcagatcagcaaggtgtacatgcac ttgcctcagacagacaacaagaagaaaatcattatcacagaggatggggaattcaaggcc ctgcaggagtggatcctggagacggatggcgtgagcttgatgcgggtgctgagtgagaag gatgtggaccccgtgcgcaccacgtccaatgacattgtggagatcttcacggtgctgggc attgaagctgtgcggaaggccctggagcgggagctgtaccatgtcatctcgtttgatggc tcctatgtcaattaccgacacttggctctcttgtgtgataccatgacctgtcgtggccat ttgatggccatcacccgacacggagtcaaccgccaggacacaggaccactcatgaagtgt tcctttgaggaaacggtggatgtgcttatggaagcagccgcacacggcgagagcgacccc atgaagggggtctctgagaatatcatgctgggccagctggctccagccggcactggctgc tttgacctactgcttgatgcagagaagtgcaagtatggcatggagatccccaccaatatc cccggcctgggggctgctggacccaccggcatgttctttggctcagcacccagtcccatg ggtggaatctctcctgccatgacgccttggaaccagggtgcaacccctgcctacggcgcc tggtcccccagtgttgggagtggaatgaccccaggggcagctggcttctctcccagtgct gcatcagatgccagtggcttcagcccaggttactcccctgcctggtctcccacaccaggc tccccggggtccccgggtccctcaagcccttacatcccttcaccaggtggtgccatgtct cccagctactcgccaacgtcacctgcctacgagccccgctctcctgggggctacacaccc cagagtccctcttattcccccacttcaccctcctactcccctacctctccatcatattct ccaaccagtcccaactatagtcccacatcacccagctactcaccgacctctcccagctac tcgccaacctctcccagctactcacccacctctcccagctactcacccacctctcccagc tactcacccacctctcccagctactcgcccacttcccctagctactcgcccacctctccc agctactcgccgacatctcctagctactcaccaacatctcccagctactcgccaacttca cccagctattctcccacttcccccagctactcaccaacctctccaagctattcacccacc tcccccagctactcacccacttccccaagttactcacccaccagcccgaactattctcca accagtcccaattacaccccaacatcacccagctacagcccgacatcacccagctattca cctactagtcccaactacacgcctaccagccctaactacagcccaacctctcccagctac tcaccaacatcacccagttattccccgacctcaccaagttactccccttccagcccacga tacacaccacagtctccaacctataccccaagctcacccagctacagccccagctcgccc agctacagcccaacctcacccaagtacaccccaaccagtccttcctacagtcctagctcc ccagagtataccccaacctcccccaagtactcacctaccagtcccaaatattcacccacc tctcccaagtactctcctaccagtcccacctattcacccaccaccccgaaatactcccca acatcccctacttattccccaacctctccagtctacaccccaacctctcccaagtactca cctactagtcccacttactcgcccacttctcccaaatactcacccactagccccacctac tcacccacctctcccaaaggctcgacttactctcccacttcccctggttactcgcccacc agccccacctacagcctcaccagcccggccatcagcccggatgacagcgatgaggagaac tga

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