Chlorocebus sabaeus (green monkey): 103242813
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Entry
103242813 CDS
T04361
Symbol
BRIP1
Name
(RefSeq) BRCA1 interacting protein C-terminal helicase 1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03440
Homologous recombination
csab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103242813 (BRIP1)
03460 Fanconi anemia pathway
103242813 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csab03400
]
103242813 (BRIP1)
Enzymes [BR:
csab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103242813 (BRIP1)
DNA repair and recombination proteins [BR:
csab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103242813 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
103242813 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF6399
Motif
Other DBs
NCBI-GeneID:
103242813
NCBI-ProteinID:
XP_008009414
Ensembl:
ENSCSAG00000005928
LinkDB
All DBs
Position
16:complement(32909226..33085551)
Genome browser
AA seq
1248 aa
AA seq
DB search
MSSMWSEYTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPADEGVSEKTEVPLSCCCTCHSKDFTNNDMNQGTSRHFNYPSTPPSERKS
TSLTCQDSPEKTTLAAKLSAKKQASIYRDENDDFQVEKKRIRPLETTQQIRKRHCFGTEV
HNLDAKVDSAKTVKLNSPSGKINSFSPRKPPGHCSRCCCSTKQGNSQESSNTIKKDHAGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSRVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGRNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKLKACPYYTARELIQ
DADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSITEVQLRFARD
ELDSMVNNNIRRKDHEPLRAVCYSLINWLEANSEYLVERDYESACKIWSGNEMLLNLHKM
GITTATFPILQGHFSAVLQKEEKISPIYGKEEAREVPIISASTQIMLKGLFMVLDYLFRQ
NSRFADDYKIAIQQTYSWTNQIDISDKNGLLILPKNKKHSRQKTAVRVLNFWCLNPAVAF
SDINGKVQTIVLTSGTLSPMKSFSSELGVTFTVQLEANHVIKNSQVWVGTIGSGPKGRNL
CATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELV
KTVIVEPQGGEKTNFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRRYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHQNDWG
ALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLAQFSRKHQKVLNVSIKDRT
NVQDTESTLEVTSLKYSTPPYLLEAACHLSPENSVEDEAKMCVQELQCPKIITKNSPLPS
GIISRKEKNDPVLLEEAVKAEKIVISRSTSPTFNKQTKRVSWSSFNSLEQYFTGKIPKAT
PELRSSENSVSSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKID
ATLTRKNHSEHPLCSEEALDPDTELSLVSKEDKQSTSNRDFETEAEDESIYFTPELYDPE
DTDEEKNDLAETDGGNRLANNSDCILAKDLFGIRTIQEGDSVREVKAEDCTDTKLNGILY
IEESKIDDIDGXKMTLINELELGKTHEIEIKNFKPSPSKTKSMFPGFK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgatgtggtctgaatatacaatcggtggggtgaagatttactttccttataaa
gcttacccatcacagcttgctatgatgaattctattctcagaggattaaacagtaagcaa
cattgtttgttggagagtcccacaggaagtggaaaaagcttagccttactttgttctgct
ttagcatggcaacaatctcttagtgagaagccagcagatgagggcgtaagtgaaaaaact
gaagtaccattgtcatgttgttgtacatgccattcaaaggattttacaaacaatgacatg
aaccaaggaacttcacgtcatttcaactatccaagcacaccaccttctgaaagaaaaagc
acttcactaacttgtcaagactcccctgaaaaaaccactctggctgcaaagttatctgct
aagaagcaggcatccatatacagagatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagaaactacacagcagattagaaaacgtcattgctttggaacggaagta
cacaatttggacgcaaaagttgattcagcaaagactgtaaaactcaactccccatcagga
aagataaactccttttctccacggaaaccccctggccactgttctaggtgctgttgttct
actaaacaaggaaacagtcaagagtcgtcgaataccattaagaaggatcatgcagggaaa
tccaagatacccaaaatatattttgggacacgcacacacaagcagattgctcagattact
agagagctccggaggacggcatattcaagggtcccgatgactattctttccagcagggat
catacttgtgtccatcctgaggtagttggtaacttcaacagaaatgaaaagtgcatggaa
ttgctagatgggagaaatggaaaatcctgctatttttatcatggagttcataaaattagt
gatcagcatacattacagactttccaagggatgtgcaaagcctgggatatagaagaactt
gtcagcctagggaagaaactaaaggcctgtccatattacacagcccgagaactaatacaa
gatgctgacatcatattttgtccctacaactatcttctagatgcacaaataagggaaagt
atggatttaaatctgaaagaacaggttgtcattttagatgaagctcataacatcgaggac
tgtgctcgggaatcagcaagttacagtataacagaagttcagcttcggtttgctcgggat
gaactagatagtatggtcaacaataatataaggaggaaagatcatgaacccctacgagct
gtgtgctatagcctcattaattggttagaagcaaactctgaatatcttgtagaaagagat
tatgaatcagcttgtaaaatatggagtggaaatgaaatgctcttaaatttacacaaaatg
ggcatcaccactgctacttttcccattttgcagggacatttttctgctgttcttcaaaaa
gaggaaaaaatctcaccaatttatggtaaagaggaggcaagagaagtacctattattagt
gcatcaactcaaataatgcttaaaggactttttatggtgcttgactatctttttaggcaa
aatagcagatttgcagatgattataaaattgcgattcaacagacttactcctggacaaat
cagattgatatttcagataaaaatgggttgttgattctaccaaaaaataagaaacattca
cgacagaaaactgcagttcgtgtgctaaacttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaagttcagactattgttttgacatctggtacattatcaccaatg
aaatccttttcgtcagaacttggtgttacatttactgtccagctggaggctaatcatgtc
attaaaaattcacaggtttgggttggtaccattgggtcaggccccaagggtcggaatctc
tgtgctaccttccagaatactgaaacatttgagttccaagatgaagtgggagcacttttg
ttatctgtgtgccagactgtgagccaaggaattttgtgtttcttgccatcttacaagtta
ctagaaaaattaaaagaacgttggctctctactggtttatggcataatctggagttggtg
aagacagtcattgtagaaccacagggaggagaaaaaacaaattttgatgaattactgcag
gtgtactatgatgcaatcaaatacaaaggagagaaagatggagctctcctggtagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtcata
acaataggaattccttttccaaatgtgaaagatctacaggttgaactaaaacgacgatac
aatgaccaccattcaaaattgagaggtcttttacctggccgtcagtggtatgaaattcaa
gcatacagggccttaaaccaggcccttggtagatgtattcgacaccaaaatgattgggga
gctcttattctagtggatgatcgctttaggaataacccaagtcgctatatatctggactt
tctaaatgggtacggcagcagattcagcaccattcaacctttgaaagtgcactggagtcc
ttggctcaattttccagaaagcatcaaaaagttcttaatgtatccataaaggacagaacg
aatgtacaggacaccgagtccacacttgaagtgacctctttaaagtacagtaccccacct
tatttactggaagcagcatgtcatctatcaccagaaaattctgtggaagatgaagcaaag
atgtgtgtccaggaactgcagtgtcctaaaattattactaaaaattcacctctgccaagt
ggcattatctccagaaaggagaaaaatgatccagtattgctggaagaagcagtgaaagca
gaaaaaattgtgatttccagatctacaagcccaactttcaacaaacaaacaaagagagtt
agctggtcaagctttaattctttggaacagtattttactggtaaaataccgaaggcaaca
cctgagctcaggtcatcagagaatagtgtctctagtcctccccgtttcaaaacagaaaag
atggaaagtaaaactgttttgccattcactgataaatgtgaatcctcaaatctgacagta
aacacatcgtttggatcatgccctcaatcagaaaccattatttcatccttaaagattgat
gccacccttactagaaaaaatcattctgaacatccgctctgttctgaagaagccctcgat
ccagacactgaattgtctctcgtaagtaaggaagataaacagtccacttcaaatagagat
tttgaaacagaagcagaagatgaatctatctattttacacctgaactttatgatcctgaa
gatacagatgaagaaaaaaatgacctagccgaaactgatggaggaaatagattggctaac
aattcagattgcattttagctaaagacctttttggaattagaactatacaagaaggagat
tcagtcagagaagtgaaagctgaggattgcacagatacaaagttgaatggaattctgtat
attgaagaaagtaaaattgatgacattgatggtnnaaaaatgactttgataaatgaactg
gaactgggaaaaactcatgaaatagaaataaagaactttaaaccgtctccttccaaaact
aaaagcatgtttcctggttttaagtaa
DBGET
integrated database retrieval system
