Cololabis saira (Pacific saury): 133421918
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Entry
133421918 CDS
T09849
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133421918 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133421918 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133421918 (grin2ca)
Ion channels [BR:
csai04040
]
Ligand-gated channels
Glutamate (ionotropic)
133421918 (grin2ca)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
133421918
NCBI-ProteinID:
XP_061567702
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All DBs
Position
21:complement(4217186..4240929)
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AA seq
958 aa
AA seq
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SIVGHTEPYTKLCCKGFCIDILKKLSRNIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFY
KRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMF
VMCLTVVAITVFVFEYCSPVGYNRSLVTAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENP
KGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRF
GTVPNGSTERNIRSNYPEMHAHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKD
EGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLADGDTQKLQTVWLTGICRN
EKKEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLLYWKLRHSVRKSDQLDFLLAIS
RGIYSCFNGVEHTDRNGSMQSPDVTTNYTQANMLKMLRTAKDMVSSARVENSLDSATKTI
ETWSRRGAENVRAGLPPRIMTTDVTHCRLPYISSITDNHSPYPQRAMTPTFPLHYGETST
QPLLEKPKMVTRPTPLRYTLPARSSQHILERTLPISSLSSPHIAIRDPAPPGSSNPHQGR
LYVENQARHPASPFVPYREFQVPEIYMEHKGPLRRKFSYPPDCMSRRRKSFSYVFDAADG
RVRGDYDEPRSCFAELRANHLLHNHAPDPAAMACGAGHYPGGSPSCNSCMKSYLEPEMDD
VPLLGKDKLNRRPSFLKATWGNDRIHQLDETKPSTSTSSNPRAMPDLFPRIVAPKLRPHK
LYGSLGHNLSCYPVAAEPAYLDPAHMGSYPYKQKLKYSDSTRLPSYREAILQNAAALRRS
SSTVVHRHYSTYLNSYTDLPVYVGPLAQGPPQFYDGSKDVCHLFPCTRHCPDNAAMLPPH
DRQVVYHDNVFGAYDGPGKREDLGSGGRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
agtattgtgggtcacactgagccgtacactaaactgtgctgcaagggcttctgcatagac
atcctgaagaaactgtcccgcaacatcaagttctcctacgacctctacctcgtcaccaac
ggcaagcacgggaagctggtccgggggatctggaacgggatgatcggcgaggtgttctac
aaacgggcagacatggccatcggctcgctgaccatcaacgaagagcgctcggagattatc
gacttctcggtgccgtttgtggagacagggatcagtgtgatggtggctcggagcaacggg
accgtctccccctctgcttttttagaaccgtacagtccggcggtctgggtgatgatgttc
gtcatgtgtctgacggtcgtggccatcacggtcttcgtcttcgagtactgcagtccggtc
gggtataaccgcagcctcgttactgctaaagatcccggaggtcccaccttcaccatcgga
aaatcggtgtggctgctgtgggggatcgtgttcaacaactccgtccccatcgagaacccc
aagggcaccaccagtaagatcatggtcctggtctgggccttcttcgccgtcatcttcctg
gcctcctacacggccaacctggccgccttcatgatccaggagcagtatatcgacaccgtg
tccggcctcagcgacaagaagtttcaaaagccacaggagcagtatcctccgttccgcttt
ggtacggtaccaaatggcagcaccgagcgcaacataaggagcaactacccagagatgcat
gcccacatggtcaaatacaaccagaagggagtggaggatgccctcaacagcctcaaaaca
ggaaaactggatgctttcatctacgacgcggctgtgctgaactacatggccggcaaagac
gaaggctgcaagctggtgaccatcggcagcgggaaggtgtttgctacaaccggctacggc
atcgccctgcagaaggattcgcgctggaagcgacccatcgacctggcgctcctgcagttc
ctggccgacggcgacacccagaagctgcagaccgtctggctcacgggcatctgccgtaac
gagaagaaggaggtgatgagcagcaagctggacatcgacaacatggccggggtcttctac
atgctgctggtggccatgggcctgagcctgctggtgttcgcctgggaacatctgctctac
tggaaactccggcactccgttcgcaaatcagaccaactggacttcctgctcgccatcagc
aggggcatctacagctgcttcaatggggtcgagcacaccgaccgcaacgggagcatgcag
agtccggacgttacgaccaactacacccaagccaacatgctcaagatgctgaggacggcc
aaggacatggtgtcctctgcccgagtggagaactccctggacagcgccaccaagaccatc
gagacctggagccggcgcggcgccgagaacgtgcgggcgggcctgcctcccaggatcatg
accacggacgtgacccactgccggctgccctacatctctagcatcacagacaaccactcc
ccgtacccccagagggccatgacgcccacctttccgcttcattacggggaaacgtccacc
caaccgctcctggagaagcctaagatggtgacccgtcccacgccgctgcggtacacgctc
cccgcccgcagcagtcagcacatcttggagaggacgctgcccatctccagcctcagcagc
ccacacatcgccatcagggaccccgctccccccggatcctcaaacccccaccagggccgg
ctgtacgtggagaaccaggctcggcaccccgcctcccctttcgtcccttacagggagttc
caagtgcccgagatctacatggagcacaaggggcctctgaggaggaagttcagctacccc
cccgactgcatgagccgccggaggaagtccttcagctacgtgttcgatgctgcagacggc
agagtgaggggagactacgacgagcctcggtcctgcttcgccgagctgagggccaaccac
ctcctgcacaaccacgcccccgatccggccgccatggcctgcggcgccggtcactacccc
ggcgggagcccctcctgcaactcctgcatgaagtcctacctggagcccgagatggacgac
gtaccgctcctggggaaggacaagctaaaccggcggccctcgttcctcaaggccacgtgg
ggcaatgacagaatccatcagctggacgaaaccaagccctcgacgtcaacgtcctccaac
ccccgggccatgcccgacctgtttccacggattgtggcgcccaagctaaggcctcataag
ctatacggcagtctggggcacaacctgtcctgctaccccgtggcggccgagccggcctac
ctggacccggctcacatgggctcctacccctacaagcagaagctcaagtactcggactcc
acccggcttccctcctacagggaagccatcctgcagaacgccgctgctctgcgccgctcc
tcgtccacggtggtgcacagacattactccacctacctgaactcatacacggacctaccg
gtgtacgtggggccgctggctcaggggccgccccagttctacgacggctccaaggacgtg
tgccacttgttcccctgtaccagacactgcccggacaacgcggccatgctgcctcctcac
gacaggcaggtggtgtaccacgacaacgtgttcggggcctacgacggcccggggaagagg
gaggacctgggttccgggggccgggagaggcggcaggtgctggtggcgcggagagtcaac
agtccctacgtgccaaagccctggggccgggtctccagcctcgagtcggaggtctga
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