Cololabis saira (Pacific saury): 133422269
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Entry
133422269 CDS
T09849
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133422269 (cacna1ha)
04020 Calcium signaling pathway
133422269 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133422269 (cacna1ha)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133422269 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133422269
NCBI-ProteinID:
XP_061568203
LinkDB
All DBs
Position
21:complement(23785767..23856806)
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AA seq
2339 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDITCQGEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCY
LGDKWNQLDFVIVMAGVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGEDIRGIYNLSVDPYYMTEEGEDS
PFICSAPRENGMLRCHDVPPSTDGGEPCLLAAPHPGSPLLGGVSVNGCVNWNLYYNVCRP
GDFNPHQGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFF
MINLCLVVIATQFSETKQRENALMREQRARFMSNDSTLASYSEPGSCYEEMLRYISHLYR
KLVRRVQRMYYGWHSKRRKKVNPNGSGGGSNNGGNGHGQGSSRGCGGSGPGNALWLRPIH
NLLQHHQHQHCRLSNGGQHTISVATTEHMDREGHVEGGEELELKSLPSRRGSTNGNSSNN
PAVVTQGMGALLGRLNGGMNYPTILPSFVCSYSSKTPPPHSKQPSPEQHPPNHPASEHTE
TLNKLYQLMGQHSRQRLLFQLAGVVPSPLLLELLSCPLCARSLETLELELGDQERGKGEA
DGLHDFPQGCDIRGRSRLRRRGVVEYRNGAVRAWINFRDKLKRIVESKYFNRGIMIAILV
NTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIV
IISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLF
IFTFSILGMHLFGCKFSLQMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMA
STSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVE
QLRDTELKMYSLMMTANGHIDPRGTMAPPIIMRTAATPMPTPKGSLGPESVLEEELLSRE
GIPQYSEAGLGFSEAGFGHVESRRGSSTSMDPSAYDQPSLSLSSPGRRSPLTPRGSGSSW
GSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGAEEDNGQDEKEEAGANMRAKPGSLELL
QASTLGPSIIGEYGDCNGRTVTYDPNVNSDPKIDFSSEDDLDDDSPFCYWIKREVQHLKP
RWCKEHEDWTLYLFSPESTFRIWCQGVISHKLFDHVVLVFIFLNCITIALERPNIQHQST
ERMFLSVSNYVFTAIFLAEMTIKVVALGFCFGKQTYLQSSWNILDGLLVFVSLVDILVSL
AYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIV
FGILGVQLFKGKFYHCEGLDTRNITNKSDCLQANYRWIRRKYNFDNLIQALMSLFVLSCK
DGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQ
DQEEEEARLREEKRLKMIEKKRRSKENGGAEAKQRPYYADYSPVRLSIHTLCTSHYLDLF
ITFIICINVFTMSIEHYNQPQYLEEVLKYCNYVFTIIFVIETLLKLMAFGFHRFFKDRWN
QLDVAIVALSIMGITLEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTV
MQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLF
RVSTGDNWNGIMKDTLRECHPDERHCFSYLPWISPIYFVTFVLMAQFVLVNVVVAVLMKH
LEESNKEAKEDAEMDAEIALEMAMERQRKQSTSSNNSSLGGTYVGPCPNSPGEEEEVRYN
DHDLLSTRKMSVSRMHSLPNDSYMFRPVRPASAPSPLEEVDILPQHQHSASVMSVHSQPC
ESRSLLQVPDVSPVHPQLSPTLTLPRIAPPTPILSPRALHKQVAVKLEAVESLAREHREK
PDSAQLSSHSPSPSPSSLPPPRSSPSALSFPPFSPSSSPLPPIQSCPFPLSPPPSSPSLL
LPPPPSPRLPSRSSSLRRPRPPSAVSLCDPADEEVYHITSSARRALSGEEGGAQESRRRA
GRSHSLSPYALPCSVNAGSSSPPPPLPPSSTRSALSLLGVGLKDARKGFEVDNEGFLDKP
PSTSAGHSDDQRRHSIEVCLPQAVIAGDSQHGQAFPVRVQSVGSNHRKKKMSPPCISIHP
PSEREPPQNASPPKLVDCSMMLRRRTPSSDSNTCVQDASANVQIRMQMQTPLTPIQAPLH
SPTHSLAPSQPSTPTHAQTPTPPHIPISPNIFIQPHAPVLPNAARFSQPRPLSPAARRSP
LAGDYIALPQFTFDQPQTRYTGGLSAGMSDADKPTCSSPFDSRLGAAAGFSAKNRRTAQ
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgttaaactgtgtgactctggggatgtttcagccctgtgaggacatt
acctgccagggggagtggtgtcgcatcctccaggtgctggacgactgcatctttgctttc
tttgcagtggagatggttatcaagatggtagccctgggaatttttggccccaactgttac
ctcggggataaatggaaccagcttgactttgtcatcgtcatggcaggagtaatggagtat
tctctggacggccacaatgccagcctgtcggcaatccgtacagtccgagtgctcaggcca
ctgagggcgatcaacagggtaccaagtatgaggatcttggtgacactgctcttggacacc
ttacccatgctgggaaatgttctcctcctctgcttctttgtctttttcatcttcggcatc
gtgggagtccagctgtgggcaggactactgcgcaaccgctgcttcctgggagaggacata
agaggaatttacaacttgtctgtagatccttactacatgactgaggagggtgaggacagt
ccattcatctgctcggccccccgcgagaacgggatgctgcgctgccacgatgttccccca
tccacggacggtggggagccgtgcttactggccgctcctcacccaggctctcctctgctc
ggtggagtcagcgttaacggctgcgtcaactggaacctatattacaatgtctgccgtcct
ggggacttcaacccccaccagggggcggtcaactttgataacattggctacgcttggata
gcaatattccaggttatcacgctggaaggatgggtggacatcatgtactatgtcatggat
gctcactctttctacaattttatatattttatattgctcattattgtgggctctttcttc
atgatcaacttgtgcctcgtggtcatcgccacccagttctctgagactaagcagagggag
aacgctctgatgagggagcagcgtgctcgctttatgtccaatgactccacactggccagc
tacagtgaacccggatcgtgctatgaggagatgctccgttacattagtcacctttaccgc
aagctggtgcgcagggtgcagaggatgtactatggctggcacagtaaacggcgtaaaaag
gtgaaccctaatggcagcgggggaggcagtaacaatggtggcaacgggcacggccagggt
tccagcaggggctgcggaggctcgggcccgggaaatgcactgtggctgaggccaatacac
aacctcctgcagcatcaccagcaccagcactgtcgcctcagcaacggcgggcagcacacc
atcagtgtggcaaccactgagcacatggacagagagggacatgttgaagggggggaggag
ctggagctgaagtcccttccttcccggagaggaagtacaaatggaaatagcagcaataac
ccggctgttgtcactcagggcatgggtgcattgcttgggcgactcaacggggggatgaat
tatccgaccatcctgccatccttcgtgtgcagctacagcagcaagacgccgccaccccac
tcaaagcagcccagcccggagcagcatccaccaaaccacccggcgtctgaacacacagag
acgctgaacaagctttaccagctcatgggacagcacagtcgccagaggctgctgttccag
ctggcgggggtcgtgcccagcccgctgctcctggagctgctcagctgccctctgtgcgcc
cgcagcctcgagactctggagctggaactcggagaccaggagagaggcaagggggaggcc
gacggactgcacgacttcccccagggatgcgacatcagaggcagaagtcgactccggcgg
cggggagtggtggagtacaggaacggagctgttcgagcctggataaacttcagggacaaa
ctgaagaggattgtggaaagtaaatacttcaaccgagggatcatgattgccatccttgtc
aacactctcagcatggggatagagtaccatgagcagcccgaggagctgactgacgtgtta
gagatcagcaacattgttttcaccagcatgtttgtcctggagatgggcttcatgcttctg
gcttttggcttgttcggatacatcagaaacccgtacaacatcttcgacagcatcattgtc
atcatcagtgtgtgggagataatcggtcagtcggatggtggcttgtcggtcctgcgcaca
tttcgtttgctgcgggtgcttaagctcgtacgcttcctacctgccctgaggagacagctg
gtcgtgctgatgaagaccatggacaatgtggccaccttctgcatgctgctgatgcttttc
atcttcactttcagtatactgggcatgcatctttttggatgtaaattcagtctgcagatg
gagaacggagataccatccctgaccgcaagaactttgatagtctgctctgggccattgtc
actgtattccagattctcacccaggaggactggaacgtggtgttgtacaacggcatggct
tcaacctcgccatgggcagctctctactttgttgctctcatgacgtttggcaactatgtg
ctcttcaacttattagttgccatcttggttgaaggcttccaggctgagggcgatgctaat
cgatcagagtcagatgatgaaaagaaatcagacaactttgaggaggatgaaaaggtggaa
cagctcagagacactgagctgaagatgtactctctaatgatgacagctaacggtcacatt
gaccctcgtggcactatggctcctcccataatcatgcgcacagcagccacacctatgccc
acccctaaaggctctctcggacctgagtccgtcttggaggaagaactcttgtccagagaa
gggatacctcaatacagcgaggccggactgggtttttctgaggcaggatttggtcatgtg
gagtctcgccgtgggagctccacatccatggatccctcagcctatgaccagccttctctt
agcctctcaagcccaggccgacgctcccctctcaccccccggggttcgggcagctcctgg
gggagccgccgctccagctggaacagcctggggagagcaccgagcctcaaaaggcgagac
accagcggggagagggagagcctgttgtctggggaaggtgcggaggaggacaacggccag
gacgagaaggaggaggctggggcgaacatgagagcaaagccagggtccttggagctgctg
caggcgtccactctcggcccctccataataggagagtacggtgactgcaatgggaggact
gtgacatacgatcccaatgtaaactccgaccccaaaattgacttctcctctgaggatgac
ctagatgatgatagccctttctgctactggattaagcgagaggtgcaacatctgaagccc
cgctggtgcaaagagcatgaagactggacgctttacttgttttctccagagagcacattc
cgtatctggtgtcaaggtgtgatctcacataaactgtttgaccatgtggttctggttttc
atcttcctcaactgcatcaccatcgctctggagagacctaatattcagcatcagagcacg
gagcggatgtttttgagtgtatccaactatgttttcactgcgatcttcttagcggagatg
accattaaggttgtagctcttggtttctgcttcggcaagcagacctacctccagtccagc
tggaacattctggacggattgttggtgtttgtgtctctggtcgacatcctcgtctctctg
gcctatactggcggaaacaggatcctgggaattctcagagtccttcgcctccttcgcaca
cttcgcccactgagggtgatcagtcgagccccgggattaaaactggttgtggagactctc
atcacctctcttcgacccattgggaatatcgtcttgatctgctgcgctttcttcatcgtc
tttggcatcttaggggtccagctgttcaaaggcaagttctaccactgcgagggtcttgac
acaagaaacatcacaaacaagtcagactgtctgcaggccaactaccgctggataagaaga
aaatacaattttgacaacttgattcaggctctgatgtctttatttgtactatcgtgtaaa
gatggctgggtcaacatcatgtatgatgggctggatgcggtaggagtggatcagcagccc
gtgaggaaccacaacccctggatgctcctctacttcatctccttcctgctcatcgtcagc
ttcttcgtcctcaacatgtttgttggcgtggtggtggagaacttccacaagtgccggcag
gaccaggaggaggaggaggcccggctgcgggaagagaagaggctgaaaatgatagagaaa
aagcgcaggagtaaggagaatggaggggctgaagccaagcagaggccctactacgccgac
tactcgcctgtacgtctgtccatccacacactgtgcaccagccactacctggacctcttc
atcaccttcatcatctgcatcaatgtgttcaccatgagcattgagcactacaatcagcca
cagtatttggaggaggttctgaagtactgtaactacgtgtttaccatcatcttcgtcatc
gagactctgctgaaactcatggcgttcggcttccacaggttcttcaaagacaggtggaat
cagctggatgtcgctatagtggcgttatccatcatgggcatcactctagaggagctgaaa
atgaaagcagcgctgccaataaatcccaccatcatcagaatcatgagagtactacggatc
gcacgagtactgaagcttctgaagatggcgaagggaatgagagcgctgctggataccgtc
atgcaagctctgccccaggtgggaaatctcggtctcctcttcatgctgctcttcttcatc
tatgctgctctgggagtggagctgtttggcaaactggagtgcaacgacaacaacccatgt
gaaggcctgagtcgtcacgccacctttgagaacttcgggatggccttcctcacactgttc
cgagtgtccactggagacaactggaatgggattatgaaagacacattaagggagtgtcac
ccagacgaacgccactgtttctcatacctgccttggatctccccgatttatttcgtgacc
tttgtgctcatggcccagtttgtgctggtcaatgtggtggtggctgttttgatgaaacat
ctggaggagagcaacaaggaggcgaaagaggatgcggagatggatgcagagatcgccctg
gagatggcgatggagaggcagcgcaaacaaagcacaagttccaacaacagctcattggga
gggacctacgttgggccttgccccaactcacctggagaggaggaagaggtgcggtacaac
gaccacgacctgctgtccaccaggaagatgtctgtgtccaggatgcactctctgccgaac
gacagctacatgttccggcccgtgcggcccgccagcgccccctcccctctggaggaagta
gacatcctcccccagcaccagcattcagcctctgtgatgtcggtccactcccagccctgc
gagagccgctctctgctgcaggttccagatgtttcccctgttcaccctcagttatctccc
accctcacgctgccccgcatcgccccgccaacacccatcctctcaccccgggcccttcac
aaacaggtggcggttaagctggaagcagtggagtctctggctcgtgagcatcgggagaag
cccgactctgcccaactgtcctcccactcaccttcgccgagcccttcctctctgcccccg
cctcgctcctctccctctgccctctcttttccacccttctctccctcttcttctcccctt
cctcccatacagtcctgcccctttcctctctcccccccgccctcgtccccatccctcctc
cttcccccgcctccctccccgcgcctgccgtcgcgctcctccagcctccgtagaccccgg
ccgccgtcggccgtctccctgtgcgacccggccgacgaggaggtgtaccacatcaccagc
tcggcccgccgcgcgctgagcggcgaggagggcggagcgcaggagagcagacgcagagcg
ggccgcagccactccctctccccctacgcgttgccgtgctctgtgaacgccggctcctcg
tctcctcctccgccgctcccgccttcctccacgcggagcgcgctcagtctgctcggggtg
ggactaaaggacgcgaggaaaggcttcgaggtcgacaacgagggcttcttggacaagccg
ccatccacatccgccggtcactctgacgaccagcggcgccactccatcgaggtctgcctc
ccgcaggccgtcatagccggcgacagccagcacggccaggcgtttcctgtgagggtgcag
tcggtcggcagcaaccacaggaagaagaagatgagtcctccctgcatatccatccaccct
ccctcggagagagaacccccccagaacgcctctcctcccaaactggtggactgcagcatg
atgctgagacgcaggaccccgtccagcgactccaacacgtgcgtgcaagacgcctcggcc
aacgtccagatccgcatgcagatgcagacgccgctgacccccatccaggcgccgctgcac
tccccgacccactcgctggcgccctcgcagccgtccacgccgacacacgcgcagacaccc
acgcccccccacatccccatcagccccaacatcttcatccagcctcacgcgcccgttctc
cccaacgccgcgcggttctcccagccgcggcctctgtcccccgccgcgaggcgctcgccg
ctcgcgggagactacatcgccctcccccagttcaccttcgaccaaccacagaccaggtac
acgggcggcctgtcagctggcatgtcagacgccgacaaacccacctgctcctcccctttt
gacagcagactgggagccgctgcaggattcagtgcaaagaaccggaggaccgcccagtaa
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integrated database retrieval system
