Cololabis saira (Pacific saury): 133422461
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Entry
133422461 CDS
T09849
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133422461 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133422461 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133422461 (grin2aa)
Ion channels [BR:
csai04040
]
Ligand-gated channels
Glutamate (ionotropic)
133422461 (grin2aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
133422461
NCBI-ProteinID:
XP_061568449
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All DBs
Position
21:complement(23545962..23759128)
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AA seq
1550 aa
AA seq
DB search
MQGMKWFGSMSLSSKRSKRRGRRSRSCGSGGNGALLSLALLMVVSTMADPAAAQKQRTGG
GSEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLM
SGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGAS
IQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVE
EDSRSQIMLKKVQSPVVLLYCSKDEAVYILDEARSLGLTGFGYIWIVPSLTTGNPEITPE
TFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLDEYGDIPEAKTSCYGQMEKTTKL
PPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKEREWEKMGKLDNGSLTIKYPV
WPRFNSFGDAEMDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGG
TYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAV
GSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVT
AMAVFMFEYVSPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKF
IVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGS
TERNIRKNYPAMHQYMTKYHLTGVQDALVNLKAGKLDAFIYDAAVLNYMAGRDEGCKLVT
IGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMS
SQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCNGTPGLLFSISRGIWS
CIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSAGPMIM
DMMAEKGNFIYADNRSYAPKDLMYGDTGDLQSYLANRHKDHLNNYIFQGSQHPLTLNDAN
PNTVEVAVSADAVQTNAKPQRALWKKSVDTLRSVPPGPAPMPDMLMPDPRLSMKTQRYLP
EDAAHSDISDCSSRAASYKDPENSKHLKPKDNLKKRSVTSKYPRDCSEVELSYLKTKQVT
GGANHSGRAAGEKIYTIDSDREMSLHSDPILYREGHGLATDDLDYPEIYSDHSDNYRKCE
QPIIHLNSSPLHHTDADLLPDSAYSKHYNLKDKNLALSPHESIDRYKQTHCRSCLSKVSS
SYPPGVPYVPAATATATAAGTRSPYNRCEACLHTANLYDISEDQLLADPLVSPTLHHQEQ
QPDDMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRF
LDSASDSQYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRSKSLYPAHGSENPFLSHSL
RDDTSSRLVHGRSSSDIYKQLAVGSPAAALGAAPIKTRNEANNLRSSVKSTSSYCSRDGR
IANDMYNKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggatgaagtggttcggcagtatgtccctcagcagcaaaagaagtaagaggagg
ggtagaaggagcaggagttgcggcagtggaggaaacggtgctctgctatccctggccctc
ctgatggtggtgtccacgatggccgaccccgcggcggctcagaagcagcgaactggtggc
ggttcagagaaagtcccggtcctgaacatcgctgtgatcctgggacgcacgcgctacatc
tcggaccgggacatcagggctctgtggagcaaagaggaccccatcgacgtcaacgtggtc
acgctgctggtcaatgagactgacccgaaaagcatcatcacacatatgtgtgacctgatg
tcggggaccaagatccacggtgtggtgtttggggatggcactgaccaagaagccatcgcc
cagattttggattttatttcctcacagacgctcatacccatcctgggcatccacggaggg
tcgtccatgatcatggctgacaaggatgtgaagtcaaccttcttccagtttggagcctcc
atccagcaggaggctctgctgatgttgaacatcatggaggagtatgactggcacatcttc
tccattgttacgtccaagttccccggctaccaggagttcatcaacatcctgaaaactaca
gtggacaacagttttgtgggctgggacctgcagaatatcatcactctggatgcagtagaa
gaagacagtcgttctcagatcatgctcaagaaggtccagtctcctgtagtcttgctctac
tgctccaaagacgaggccgtctacatcctggacgaggctcgctctctgggcctgactggg
tttggttacatctggattgtgccgtcactcaccaccggaaacccggaaataacgccagag
acgtttccatcgggaatgatttcagtgtcgtacgatgactgggactacccgctggaagca
cgagtccgggatggtcttgggatcataacgtctgcagcggcagccatgttggacgagtat
ggcgacatccccgaggccaagacgtcctgttatggccagatggagaaaaccacaaagctg
ccgcccagcgcactacataagtacatgatgaatgtcacatgggatggcagagacttgtcg
ttcacagaggacggctaccaggaaaacccaaagctggtggtcatagttctcaacaaggaa
agagagtgggaaaagatggggaaactggacaatggcagcttgacaataaagtacccagtg
tggccacgtttcaactccttcggggacgctgagatggacgacaaccacctgtccattgtc
accttggaggagaaaccttttgtcattgtggaggatgtggaaaggctcactggtacctgc
atgagaaactctgtgccctgtaggaagcatatcaaagataacacaacagaagctggtgga
acatatatcaaaaaatgctgcaaagggttctgcattgatatcctaaagaagattgctaag
tatgtaaagttcacgtacgacctgtacttggtcactaatgggaagcatggcaagaaaatc
aacaacgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtc
ggttctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccattcgta
gaaactgggatcagcgtcatggtctcgcgtagtaatggcacagtctcgccttcagccttc
ctagagccattcagtgcgtcagtgtgggtgatgatgtttgtcatgctcctactggtgact
gcaatggctgtctttatgttcgagtacgtcagtcctcttggctttaacagaaacctggca
cagggaaaagacccccacggaccttcattcacaatggggaaggccgtgtggctgctgtgg
ggtctggtctttaacaactctgttccagtgcagaacccgaaaggaacaaccagcaagttc
atagtgtctgtgtgggccttctttgctgtcatttttctggcctcctatactgccaacctg
gctgccttcatgattcaggaagagtttgtggatcaagtcactggtctttcagacaacaag
tttcagaacccatatgcatattcgcctccgttccgctttgggacggtccccaatggatcc
actgagaggaacatcaggaagaactaccctgccatgcaccagtatatgaccaagtatcat
ctgactggggtccaggacgcacttgtcaacctcaaagccggcaaactggacgccttcatc
tatgatgctgcggtgctgaactacatggctggcagggatgagggatgtaagctggtgacc
attggcagcgggtacatctttgctaccactggttatggcattgctctgcaaaaaggttcc
tactggaagcgacaggtggacctggctatcctggcaatcattggggatggtgaaatggaa
gaactagaagcccagtggctgactggaatttgccacaatgagaagaacgaggtgatgtca
agtcagctggatgtggacaacatggcgggggtcttctacatgctggccactgccatggga
ctgtccctcatcacctttgtctccgagcatctcttctactggagactcagatactgcttc
accggagtctgcaatggcacgcctggtcttcttttctccatcagcaggggaatctggagc
tgcatccatggagtccacattgacatgaagaaaaagacagatcttgactttagcccccag
gataaaatgctcaaactcatcaagtctgccaaacagatgaccaacatgtcgaacctgagt
ggctcgcgcatgaactcgcccaaaagagagttcatgcactcagctggccccatgatcatg
gacatgatggcagagaagggcaacttcatctatgccgacaatcgaagctatgctccgaaa
gatttaatgtatggggacactggtgatttgcagtcatatcttgctaaccgccacaaggac
caccttaacaactatatcttccagggcagccagcatcctttgacgctgaatgatgccaat
ccaaacacagttgaagttgcagtgagtgctgacgctgtccagaccaacgccaagccacag
cgggcgctttggaagaagtcagtggatacacttcgctctgtgccaccagggcccgctccg
atgcctgacatgctgatgccagacccacgactgtcaatgaagacgcagcgctacctccca
gaggacgcggcccactctgacatctctgattgttcaagcagagcagcctcctacaaggac
ccagaaaacagcaagcacctgaaacccaaggacaacttaaaaaaaagatcggtgacgtcc
aaatacccaagggattgcagtgaggtggagttgtcctacttaaaaacgaagcaggtcact
ggcggagccaaccacagtgggagagcagcaggagagaaaatctacaccatcgactcagac
cgagagatgagcctccattcagaccccattctctaccgtgaaggtcatggtcttgccaca
gatgatttggattaccctgaaatatactctgaccacagcgacaactacaggaagtgtgag
cagcccatcattcatctcaattcctcacctttacatcacacagacgcagatcttctacca
gactcagcttactctaaacactacaacttgaaagacaaaaaccttgctttgtcccctcat
gaatccattgatcgctacaagcagacacactgccgttcctgcttgtccaaagtcagctct
agctacccaccaggagttccatacgtccctgctgcaactgcaactgccacagccgctggc
acgcgctcaccttacaatcggtgcgaggcatgcctccacacagccaatctgtatgacatc
agtgaagaccagcttctggcagatcctttggtcagtcccaccttgcatcaccaagagcag
cagccagacgacatgtttggtctctattggccacagacagatggaccccatgttcaaaag
agaaaccgcttgaggttgagtcgtcagcactcctttgacaatatcatgctagaaaagccc
aaggatgtggacctgggccgaccagcacgcagcgtcagccttaaggagaaggatcgcttc
ctggactctgcatctgactctcagtatgcaaatctcttcggcatgcgcccctactctggc
agactgttcggcactgggtctaaatctatgctgtttaaccacaacctggaggaaagcaag
aggagcaagtccctgtacccggcccatggctcggaaaaccctttcctcagccactcgctg
agggatgacaccagcagcagactggtccatgggcgtagctcctctgatatttacaaacag
ctggcagtaggttctcctgctgcagcgctgggagcagcccccatcaaaacacgcaacgaa
gcgaacaatctccgctcttccgttaaatccacctcttcatactgctcaagggatgggcgg
atagctaatgacatgtacaataaagagcatgtgatgccttactcagccaataagactagt
gcataccctgccccacgtggcgtcctaaactcagcccagttcagcaatagacgggtgtat
aagaaaattcccagtctggagtcagatgtttag
DBGET
integrated database retrieval system
