Cololabis saira (Pacific saury): 133423398
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Entry
133423398 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate decarboxylase 2-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00250
Alanine, aspartate and glutamate metabolism
csai00410
beta-Alanine metabolism
csai00430
Taurine and hypotaurine metabolism
csai00650
Butanoate metabolism
csai01100
Metabolic pathways
Module
csai_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
133423398
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
133423398
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
133423398
00430 Taurine and hypotaurine metabolism
133423398
Enzymes [BR:
csai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
133423398
BRITE hierarchy
Motif
Pfam:
Pyridoxal_deC
CCDC106
SR-25
Med19
Beta_elim_lyase
Aminotran_5
LCE
TolA_bind_tri
DUF913
LCD1
Motif
Other DBs
NCBI-GeneID:
133423398
NCBI-ProteinID:
XP_061569561
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All DBs
Position
22:31960617..31995539
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AA seq
734 aa
AA seq
DB search
MSCVWQQEPSGYSPCVEIDSSSVRTKERLGSPAWLKQEQDDLRIIKWENFHSGASADAVQ
DNTPSSAMSSGSHGDGLPPKVLLTITKLQCLLESKQERIVSLERQVDDLMQDRKFLRSQI
ENLTSNRSLQAFVSPSPVVEAPKSSKVQHSESRPRKRERASSSSSSSSDGGSEASDASEV
SAASSEHRRKKHHKDKKRSKKGKDYSRKRATGVQYVIHRYKQVLSAFVKKKSMSEAFRHL
GIDRNTIANTASIAELHLAGKDMVPLVGMFRQGEETLVSYAQRCTLVIDSDAELSRKIDQ
MKANCELLPISGKRSRXLLSHMQPLGGAADRLDMVGLAADWLTSTANTNMFTYEVAPVFV
LLEYVTLKKMREIIGWTDGRGDGIFSPGGAISNMYAMLLARFKMFPEVKEKGMSSVPRLV
AFTSEHSHFSIKKGAAALGIGTESVICIKADECGKMIPADLERRILEAKQKGFVPFFVSA
TAGTTVYGAFDPLIAISDICKKYNIWMHVDGAWGGSLLMSRRHRWKLDGVDRQDTGNSVT
WNPHKMMSVPLQCSALLVREEGLMQNCNQMHACYLFQQDKHYDLSYDTGDKALQCGRHVD
IFKLWLMWRAKGTIGFEXQIDKCLELSEYLYNKIKDREGYEMVFDGKPQHTNVCFWYLPP
GMRYMEDKEEKKKRLHKVAPVIKARMMEYGTTMVSYQPQGDKVNFFRMVISNPAATFEDI
DFLIEEIERLGHDL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgtggcagcaggagccgtcgggttattccccgtgcgtggagatcgactcc
agctccgtgaggaccaaagagcggctgggctccccggcctggctgaagcaggagcaggac
gacctccgcatcatcaaatgggagaacttccactctggagcttcagccgacgctgttcag
gacaacacgcccagcagcgccatgtcctctggctcgcacggggacggcctccctcccaag
gtgctgctgaccatcaccaagctgcagtgcctgctggagagcaaacaggagcgcatcgtg
tcgctggagaggcaggtggacgacctgatgcaggaccgcaagttcctgcgcagccagatc
gaaaacctcaccagcaatcgctccttgcaggctttcgtttcgcccagtccagtcgtggaa
gctcctaaatcaagcaaggtgcagcattcagaaagcagacctcgaaagagggagcgggct
tcttccagttcctccagcagcagcgacggcggctcggaggcgtccgacgcttcggaagtg
tcggcggcctcaagcgagcacagacggaagaaacaccacaaggacaagaaaagatccaag
aaagggaaggactacagcaggaagagagccaccggcgtccagtacgtcatccatcgctac
aaacaagtcctgtctgctttcgtcaagaagaagagcatgagtgaggcgttccgccacctg
ggcatcgaccggaacaccatcgccaacacggcgtccatcgccgagctgcacctagccggc
aaagacatggtgcccctggtgggaatgttccgccagggggaagagactctggtcagctac
gcccaacggtgcaccctggtcatcgacagcgacgccgaactgtccagaaagatcgaccag
atgaaagccaactgtgagctgctgcccatctcagggaaacggtccaggncgttgctttct
cacatgcagccactggggggcgctgcagacagattagacatggtcggcctggcagccgat
tggctaacgtccaccgccaacaccaacatgttcacctatgaggtggctccggtgtttgtg
ctgctggaatacgtcactctgaagaagatgcgggagatcattggctggacggacgggcga
ggagacggcatcttctcccccggtggagctatttctaatatgtacgccatgctgctcgcc
cgcttcaagatgttccctgaagtgaaagagaaaggcatgtcatctgttcccagactcgtg
gccttcacgtcggagcacagccatttttcaatcaaaaaaggagcggcagctctcggcatc
gggactgaaagcgttatctgcatcaaagcagatgaatgcggtaaaatgatcccggccgac
cttgagaggaggatactggaggcgaaacagaagggttttgttccgttcttcgtgagtgcg
accgcggggacgacggtgtacggagccttcgaccctctcatcgccatctccgacatctgc
aaaaagtacaacatctggatgcatgtggatggagcgtggggaggaagtctgctcatgtcc
agaagacacaggtggaagctggatggagttgacaggcaagacacgggcaactctgtaaca
tggaaccctcacaagatgatgtccgtccctctgcagtgctccgcgctgctggtcagagaa
gagggtctgatgcagaactgcaaccagatgcacgcctgctacctgttccagcaggacaaa
cattacgacctctcctacgacaccggagacaaggcgctgcagtgtggacgccacgtggac
atcttcaagctgtggctcatgtggagagctaagggcaccattggcttcgagnctcagatt
gacaagtgtttggagctgtccgagtacctctacaacaaaatcaaagacagagaaggatac
gagatggtcttcgatggaaaaccgcagcacaccaacgtctgcttctggtacctccccccg
gggatgcgctacatggaggacaaagaggagaaaaagaaacgcttgcacaaggtggctcca
gtgataaaagccaggatgatggagtacgggacgaccatggtcagctatcaaccccagggg
gacaaggtcaactttttccgcatggtgatctcaaaccccgccgccaccttcgaggacatc
gattttcttatcgaggagattgaacgcctcggccacgatctataa
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