Cololabis saira (Pacific saury): 133435280
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Entry
133435280 CDS
T09849
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00052
Galactose metabolism
csai00511
Other glycan degradation
csai00531
Glycosaminoglycan degradation
csai00600
Sphingolipid metabolism
csai00604
Glycosphingolipid biosynthesis - ganglio series
csai01100
Metabolic pathways
csai04142
Lysosome
Module
csai_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
133435280 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
133435280 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
133435280 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
133435280 (glb1)
00511 Other glycan degradation
133435280 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133435280 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133435280 (glb1)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
133435280 (glb1)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133435280 (glb1)
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
133435280
NCBI-ProteinID:
XP_061573108
LinkDB
All DBs
Position
1:complement(19300389..19309481)
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AA seq
654 aa
AA seq
DB search
MSEKTSCLLRVCALLLLLFGQSLQGPPSFSVDYKDDCFRKDGQRFRYISGSIHYSRIPRV
YWKDRLLKMYMAGLNTIQTYIPWNYHEKYPGQYNFSGDRDVEYFLKLAQDIGLLVILRPG
PYICGEWDMGGLPAWLLSKKDIVLRSSDPDYIAAVDKWMGKFLPMMKPYLYQNGGPIITV
QVENEYGSYFACDYNYMRHLTKLFRSHLGDEVVLFTTDGAGLNFLKCGSIQGLYATVDFG
PGSNITAAFEAQRHVEPHGPLVNSEFYTGWLDHWGSRHSVVSSAYVAKSLNQILSTGANV
NMYMFIGGSNFGYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFAIQEVIKMYRKIPQG
PVLPSTPKYAYSTVTMKKLQTVSDALEKLSYSGPVKSIYPQTFIDLNQSLGFVLYRTTLP
VNCSSATPLSSPLNGVHDRAYVSVDGVAVGILERNKAITVNVTGKAGSQVDILVENMGRI
NYGRGINDFKGLVSNLTLGKELLVGWTMYSLSIDEAVGQGLLWETTSTQTQPPQSASLSL
PTFYGGSFTIPDGIPYLPEDTYVKLPNWKKGQIWINGFNLGRYWPDRGPQVTLFVPANIL
STDAPNNVTVLELEGASCNSQPCTVEFTTTPILNATVQPEYEQHRRLSAKEDLL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaagacatcatgtcttctcagggtttgtgccttactgctgctgctgtttgga
caatctctacagggacctccttcattcagcgtggattacaaggacgactgcttccgtaag
gatggacaaaggtttcgctacatatcaggaagcatccactacagccggatccccagagtc
tactggaaggaccgccttctgaagatgtatatggctggactgaacaccatccagacgtac
attccctggaattatcacgagaaatatccgggtcagtacaactttagcggagacagagat
gtggaatatttccttaagctggcccaggacatcgggttgctggtcatccttcggccaggc
ccctacatatgtggagagtgggacatgggcggtctgcctgcctggctgctcagcaagaag
gacatcgtgctgcggtcttcagatccagattacattgcagctgtggataagtggatgggg
aagtttctgcctatgatgaaaccttacctgtatcagaacggcggtcccatcattactgtg
caggtggagaatgaatatggaagttattttgcctgtgactacaactacatgcgtcacctg
accaagttgttccggtctcatctgggtgacgaggtggtgctgttcactacagatggagca
ggactcaacttcctcaagtgtggctctattcaaggcctgtatgccactgtggactttggg
ccaggttctaacataactgccgcctttgaagcacagcgacacgttgaacctcacggacct
ttggtgaactctgagttttacaccggctggctggaccactggggttcccgtcactctgtc
gtgtcgtctgcttatgtggccaaatcgcttaatcagattctgtccacgggagcgaatgtc
aacatgtacatgttcataggtggatccaactttggatactggaatggcgccaactcgccg
tacgccgcacagcccacaagctacgactacgatgctccattatcagaagcgggggacctc
acagagaaatactttgctatccaggaagtcatcaaaatgtaccgcaagatcccgcaggga
ccagtgctaccatcaactcccaagtacgcgtacagcacagttacaatgaagaagcttcag
actgtatcggatgccctagaaaagctgtcctactctggtcctgttaaaagcatctatccc
cagacgttcatagacttgaatcagtctcttggtttcgtgctctataggactacgttgcct
gttaactgcagctcagccactcctctgtcgtcgcccttgaacggggtccacgacagagcg
tacgtgtcagtggacggggtggctgtaggaatccttgagaggaacaaagccataacggtg
aatgtgactgggaaggctggcagtcaagtggacatactggtggagaacatgggtcgaatc
aactatggaagaggcatcaacgactttaagggtttggtatccaatctgactttggggaag
gagctgctcgtgggctggaccatgtacagtctgagcattgatgaagcagtcggccagggc
ctgctctgggaaacaacatccacacagacacaaccccctcaatctgcttctctgtccctt
ccaaccttctatggaggaagcttcacaatccccgatggcatcccatacctccctgaagac
acctacgtcaagcttcccaactggaagaaggggcagatctggattaacggcttcaatctg
ggacgttactggccagatcgaggccctcaggtgacactttttgtcccagccaacatcctc
agcacagacgcgcccaacaatgtcactgtgttggagctggaaggggcttcttgtaactcg
cagccgtgcaccgtggagttcacgaccaccccgatccttaatgcaacagtccagcctgaa
tacgaacagcaccggagactttctgctaaagaggatttactgtga
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