Cololabis saira (Pacific saury): 133440623
Help
Entry
133440623 CDS
T09849
Name
(RefSeq) hemicentin-1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133440623
04147 Exosome [BR:
csai04147
]
133440623
04090 CD molecules [BR:
csai04090
]
133440623
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
csai00537
]
133440623
Cilium and associated proteins [BR:
csai03037
]
Other cilia and associated proteins
Stereociliary proteins
133440623
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133440623
Exosomal proteins of bladder cancer cells
133440623
CD molecules [BR:
csai04090
]
Proteins
133440623
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
csai00537
]
Antigens
133440623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
Ig_5
V-set
Ig_4
C2-set_2
V-set_CD47
Ig_6
C1-set
PKD_3
C2-set
PKD
Motif
Other DBs
NCBI-GeneID:
133440623
NCBI-ProteinID:
XP_061573928
LinkDB
All DBs
Position
3:30257085..30274638
Genome browser
AA seq
1556 aa
AA seq
DB search
MKKRSFLGLNPVETEVKIEPSINPVVVGGAVTLSLSPSVTLTSGTWAVGKSPILTWQEDQ
QAVFPSHSGRAVVNVTTGALTVTTLTEEDSGVYTVQSPDPQLRASASITIIEPISNVTLS
VNQTNLTEFRSSAFLECSVSTGTFLSFLWMNGSSEVTTSDRVHLTEGNTTLIIVSVTRHD
SGPFRCYVFNDVSDDLSEPVIFTLSYGPDNMALTVNGLNKTSFPAGSNLTLLCTADSSPP
AQLQWASRGNLVNRTDTLLQLFSVTEHQSGSYSCLAFNNHTNTHNNITKHITILKSGSDQ
ETLNASLIPLLFVAGFLLSLLGKKEEKRSRSQHFYVYTFWFPPKKKQKRKMKSPVAFVLI
LTVITFTDHVCSQRLSEKSVPVGSNETLLSEVNVTVGTWTFNGDIIVLIYPGGFILSKTW
EGRIRFSPSMSSLTIMSLQTNDSGEYKLNHVDVLRVQVKLSVQVPISDVTLWANATDLVE
FNNSVVLMCSVSNGSSLSYEWLRDNSTITARGDVQLSNGNATLTIAGVTRHDKGSYRCNV
SNGLGSEVSPAVHLSISYGPSNTTMMIMPMMYMHKTGTNITLSCSTQSQPPATVQWMVDG
VNLNQTSSTLQLENVTQNNSGNYKCVFHNTVTSRFAMATTVVRIMDPITAVVVNPTVGPA
ILHEAFTLRCTVTGPFDNIQWWKNGELISADNTTVFDMNNMTLTLNPVQHSDGGSYQCWA
SNLVSNMTSTSYEVEVNYGPEKIAIMGPNVVKTGDNVTFRCSVASHPPSNFKWSFNGSVV
SNMSEYATPPLTKDMSGKYTCMAFNNVTNRNSSADIMLSVIDPIEDVQIDAQMNPVMEGY
AYNLTCNVTGPADHVSWMKDGEYLQMDNRTLFYMDNKTLMFMPLKRHDTGNYHCMAINAV
GNMTSPPFNLLVNYGPENLAIMGPTAVKTGDNVTLRCWAASYPPSFFKWSFNGSVVSNMS
EYATPPLTKDMSGKYTCMAFNNVTNKNSTTYIMLSVVDPIEGVKIEAQMNPAIEGDSYNL
TCNVTGPADHVYWMKDGEYLKMDNRTLFYMDNKTVMFMPLNRHHAGNYHCMAINAVGNMT
SPPYMFLVNYGPENVYIMGPNAVKTGGNVTLSCHATSAPPSLFQWSFNGSVVSNMSEYAT
PPLTKDMSGKYTCMAFNNVTNKNSTTYIMLSVVDPIEDVQIEMQMNPAIEGYAYNLTCNV
TGPAVHVYWMKDGEHLKMDNRTLFYMNNKRVMFMPLKRHDAGNYHCMAINAVGNMTSPAY
NVIVNFGPDTPIIAGLRYAETGRHAFFNCSAMSVPPSYYTWWFNGSNVANTSMFTAGPLS
LNMSGQYTCMAHNNVTGMNSTNSIELTVVEAIESVMIQNRTMPINNENFTLICHVVGPYD
MIDWMKDNMSLKMSSSSGSGQHKSYHAENNMLHFTPVTIDNDGTYQCVATNLAARHESQQ
YTLLVNYGPLMVTISGPDLEDASVSFTCSADSRPEPDFRWFFNNLSMPLTSGAVFKFAPI
EAKEGNYICKATNPVTNVISYQSKEFAIGGHAAAVHYPAQGGLMLMSVFAFTVHLL
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagaagtttcctgggcttgaatcctgtggagacagaggtgaagatcgagcct
tccatcaaccctgttgttgttgggggtgctgtgacgctgtcgctgtctccttctgtgact
ttgactagtggaacatgggcggtgggtaaatcccccatcctcacctggcaggaggaccag
caggcagtattccccagtcacagcggcagggcggtcgtgaatgtcaccacgggagcgctc
actgtgaccactctgacagaggaggactcaggagtctacacggtgcagagtcctgacccc
cagctgagggccagcgcttccatcaccatcattgaacccatttcaaatgtgacactgagt
gtgaatcaaaccaacctgaccgagttcaggagctcagcgttcctcgagtgctccgtctct
actgggaccttcctctcattcctctggatgaacggcagctctgaggttacgaccagcgac
agagttcatctcacggagggaaacaccacgctcatcatagtcagtgtgacccgccatgac
tctggaccgttcaggtgttacgtgttcaatgatgtcagtgacgacttaagtgaaccagtc
atctttaccctcagctatggcccagataacatggctctcaccgtgaatggactcaacaag
acatcctttccagcgggatccaatctgaccctgctctgcaccgcagactccagccctcca
gctcagcttcagtgggcttccagaggaaacctcgtgaacaggacggacacattgttgcag
ctcttcagtgtcactgagcaccaaagtggttcctattcctgcctggcttttaacaatcac
accaacacacacaataatatcaccaaacacatcacaatattaaagtcgggatctgaccag
gagacattgaacgcgtcattaattcctctgctgtttgtagctggatttcttctttcactg
ctaggaaaaaaagaagaaaagagatctaggagtcaacacttttatgtttacacattttgg
ttcccacctaagaagaaacagaagaggaagatgaagtccccggtggcgtttgttcttatc
ctgaccgtgataacttttacagatcatgtgtgtagtcaaaggctgtctgaaaagtcagta
ccagtgggaagcaacgagacactgttgagtgaagtcaatgtaacagtggggacatggaca
ttcaacggggacatcattgtgctcatttacccaggaggttttatcctaagtaaaacttgg
gagggcaggatcaggtttagtccaagtatgtcgtctctgactataatgtcccttcagacg
aacgattccggcgagtacaaattaaaccatgtggacgttttacgtgttcaggtgaagctg
tcagtccaagttcctatttcagatgtaactctgtgggccaacgcaaccgatctggtggaa
tttaataactcagtagtcctcatgtgctccgtgtccaatggctcatctctgagttatgag
tggttgagggacaactccaccatcacagccaggggagacgtccagctcagcaacggaaat
gccactctcaccatagctggagtgactcgccacgataagggctcgtacaggtgtaatgtg
tctaacggactcggtagtgaagtcagccctgctgtacatctcagcatcagctatggtccc
agtaacacaacgatgatgatcatgcccatgatgtacatgcacaaaacaggaactaacatc
acactgtcgtgctcaacgcagtcccaacctccagcaacggtccagtggatggttgatgga
gtcaacctgaaccaaaccagctccacactccagctggagaatgttacccagaacaactct
ggaaattacaaatgtgtatttcacaacacagtcacatccaggttcgccatggcaactaca
gtagtcaggattatggatcctatcactgcggttgtagttaaccctaccgttggtccagcg
atacttcatgaggcctttactctccgctgcacggtgacagggccttttgataacattcag
tggtggaagaatggcgagctcatttctgctgacaacacaacagtctttgacatgaacaac
atgacgctgactcttaatccagtccagcattctgacggtggaagttatcagtgctgggct
tctaatctcgtgagcaacatgaccagcacctcctacgaggttgaagttaactatggacca
gaaaaaatcgctatcatgggaccaaatgtggtaaagacaggagacaatgtcactttcaga
tgctcggtggcgtcacaccccccgagcaacttcaaatggtctttcaatggttctgtagtc
tccaacatgtctgagtatgccacacctcctcttaccaaagacatgagtggaaagtacacc
tgcatggccttcaacaatgtcaccaacagaaacagctctgctgacatcatgctttctgtt
attgatccaatagaagacgtacaaatagatgcacagatgaatccggtcatggaaggttat
gcatataatttaacatgcaacgtaactggacctgctgatcacgtgtcctggatgaaggat
ggggaatacctgcaaatggacaacagaactcttttctacatggataacaagacactcatg
ttcatgccactgaaacgccacgatactggaaactaccactgtatggctattaatgctgtt
gggaacatgaccagccctcctttcaacctccttgtcaactatggaccggaaaatttggct
atcatgggaccaactgcagtaaagacaggagacaatgtcacactcagatgctgggcagct
tcatacccgccaagcttcttcaaatggtccttcaatggttctgtagtctccaacatgtct
gagtatgccacacctcctctgaccaaagacatgagcgggaagtacacctgcatggccttc
aacaacgtcacaaacaaaaacagcacaacctacataatgctttcggttgttgatccaata
gaaggtgtaaaaatagaagcacagatgaatccagccattgaaggggattcatataattta
acatgcaacgtaactggacctgctgatcatgtgtactggatgaaggatggggaatacctg
aaaatggacaacagaactcttttctacatggataacaagacagtcatgttcatgccactg
aatcgtcaccatgctggaaactaccactgtatggctattaatgctgtcgggaacatgacc
agtcctccttatatgttccttgtcaattatggacccgagaatgtatatatcatgggacca
aacgcagtaaagacagggggcaatgtcacactcagctgccatgcgacatcagcccccccg
agcctcttccaatggtccttcaatggttctgtagtctccaacatgtctgagtatgccaca
cctcctcttaccaaagacatgagcgggaagtacacctgcatggccttcaacaacgtcaca
aacaaaaacagcacaacctacataatgctttcggttgttgatccaatagaagatgtacaa
atagagatgcagatgaatccagcgattgaaggttatgcatataatttaacatgcaacgta
actggacctgctgttcacgtctactggatgaaggatggggagcacctgaaaatggacaac
agaactcttttctacatgaataacaagagagtcatgttcatgccactgaaacgccacgat
gctggaaactaccactgtatggctattaatgctgtcgggaacatgaccagtcctgcttat
aacgtcattgtcaattttgggcctgatacacccatcattgctgggctacgttatgcagaa
acagggcggcatgcattcttcaattgctccgccatgtcagtgccgcccagttattatact
tggtggttcaacggctccaatgtggccaacacatcaatgttcacagctggcccactgtcg
ttaaacatgagcggacaatacacctgcatggcccacaataatgtgacaggaatgaacagc
acaaactccatagagctcactgttgtagaggcaattgagtcagtgatgatccaaaaccgc
acaatgcccataaacaatgagaacttcactctcatttgtcatgttgttggaccgtatgac
atgattgactggatgaaggacaacatgtccctcaagatgtcctcctcctccggcagtggc
caacacaagtcgtaccacgctgagaacaatatgctccacttcactccagtgacaatagac
aacgatgggacatatcagtgtgttgctaccaatctggctgctcgtcatgagagtcaacag
tacacgctactcgtcaactatggtcctctgatggtgaccatctctggtccagatttagag
gacgcctctgtgtcgtttacatgttctgccgattctcggccagaacctgacttccgctgg
ttctttaacaacctgtcgatgcctctaaccagtggagccgttttcaagttcgctccaatc
gaagcgaaagaggggaactatatatgcaaggcgacaaacccagtgacaaacgtcatatcg
taccaaagtaaagaatttgccatcggaggtcatgctgctgcagtccactaccccgcccaa
ggaggtctgatgctgatgagtgtgtttgctttcactgttcatctgctgtga
DBGET
integrated database retrieval system