Cololabis saira (Pacific saury): 133444369
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Entry
133444369 CDS
T09849
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03020
RNA polymerase
csai04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133444369 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
133444369 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133444369 (polr3b)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133444369 (polr3b)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
133444369 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
133444369
NCBI-ProteinID:
XP_061578094
LinkDB
All DBs
Position
5:complement(40917771..40945789)
Genome browser
AA seq
1132 aa
AA seq
DB search
MDVLGAEFGDMSRQELAAPVNTVTEKWKLLPAFLKVKGLVKQHIDSFNYFVNVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLAGKTQMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRFLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHPKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GQPMVKNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQIALYEYMVNKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNTKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHNILDADGICCPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYND
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgttgggggcagagttcggggacatgagtcgccaggagctggcggctcctgtc
aacaccgtgacggaaaaatggaaattgctaccagcctttctgaaggtgaaaggtttggtg
aagcagcacattgactcgttcaattatttcgtcaatgtggagatcaagaagattatgaaa
gcaaatgagaaaatcacaagtgacgctgacccgatgtggtacctaaaatacctcaacatc
tatgttggcatgcctgatgtagaagaaagcttcaacgtaaccagaccggtctctcctcat
gagtgtcgactcagagatatgacctactcggcacccatcacagtggacatagagtacacc
cgcggcagtcagaggatcattcgcaatgctttgcccattggaaggatgccgatcatgctg
agaagctcaaactgtgttctcgcaggaaagacacagatggagttttccaaactcaacgag
tgtcctctggacccaggtggttatttcattgtgaaaggtcaggagaaagtcatcctgatc
caggaacagctgtctaagaatcgaattattgtggagcaggacaggaagggagcagttgga
gcctcagttaccagctccacacacgagaagaaaagcagaacaaatatgatcgtgaaacaa
ggccgcttctacctcagacacaacacactgtccgaggatgctcccatcgccatcattttc
aaggggatgggagtagagagtgaccaggagatcgtgcagatgatcggcacagaagagcac
gtcatggccagcttcgccccaagcctggaggagtgtcagaaagcccagatcttcacgcag
actcaggctctgaggtttctgggtaataaagtgcggcgacagcgcatgtggggaggcccc
aagaagaccaagatggaggaggccagagagctgctggcatcgctcatcctcacccacgtg
cctgtaaaagagtttaactttcgggccaagtgtatttacctggctgtgatggttcggagg
gtgatcctggctcaaggggacaacaaagtggacgacagagattactatggcaacaagcgt
ctggagttggctggacagctcctgtctctgctgtttgaggatctgtttaagaagtttaac
tctgagctgaagaaaattgctgaccagatcatccccaagcagagagcagctcagtttgat
gtggtcaagcacatgcggcaggatcagatcaccaacggcatggttaatgccatttccacc
ggcaactggtctctcaagagattcaagatggaccgtcagggtgtcacccaggttctgtct
cggctctccttcatttcagctcttggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccacgttccctgcagccgtcacagtgggggatgctgtgtcca
tctgacactcctgagggagaggcttgtggtttggtgaagaacttggctttgatgacacac
atcaccaccgacatggaggacgggccgatcatcaaactggccttcaacctcggagtggaa
gacgtcaaccttctctgtggagaggagctgtcctacccaagcgtcttcctggtcttccta
aatggtaacattctcggtgtgatcagagaccacccgaagctcgtcagcactttccgactc
atgcgcagggccggcttcatcaatgagtttgtgtccatctccactaacctgactgaccgt
tgcgtctacatctcatctgatggaggaagactctgcagaccgtacatcatagtgaagaag
ggccagcccatggtgaaaaacaaacacattgaggatttgtctcaaggctatagaaccttt
gaagatttcctccatgaaggcctggtggagtacctggatgtcaacgaggagaatgactgt
cagatcgctctttatgaatacatggtcaacaaagatacaacacacttggagatcgagccc
ttcacgctgcttggagtgtgtgccggcctcattccgtatccccaccacaaccagtcgccc
aggaacacctaccagtgcgctatgggcaagcaggccatgggaactatcggctacaaccag
aggaaccgcattgacactctgatgtacctgctggcatatcctcagaggccaatggtcaaa
actaaaactatcgagctgattgattttgagaagttgccagccggtcagaacgccaccgtg
gctgtgatgagctacagcggctacgatattgaggatgctctggtcctcaacaaagcctca
cttgacagaggatttggtcgatgccttgtctacaagaataccaagtgcacgctgcggcgt
tacaccaaccagacttttgataaagtgatgggacccatgctggatgcagccacacgcaag
cccatctggagacataacatcctggatgctgatggcatctgctgcccgggtgagaaagtg
gagaacaagcaggtgttggtgaataaatctatgccaactgtcacccagacgccactggag
ggcagtgcccagccaggccagccccagtacagagacgtgcccatcagctataaaggctcg
acagactcgtacatcgagaaggtcatgatctcgtctaacgctgaagatgccttcctcatt
aaaatcctcctgaggcagaccagaagaccagagatcggagacaaattcagcagtcggcac
ggacagaaaggtgtttgtggcctcattgtgccacaggaggacatgccgttctgcgacacg
ggcatctgtccagacatcatcatgaaccctcacggatatccctccagaatgacggtggga
aagttgatcgaactgctggccgggaaggcgggagtcctggacggacgctttcactacggt
acggctttcggtggcagcaaagtgaaggacgtgtgtgaggatctaatccgttacggatac
aactaccagggcaaggactacgtcacctcaggaattactggagaacccctggaggcctac
atctactttggacccgtctattatcagaaactgaagcacatggttcttgataagatgcat
gccagagcccgtggtcccagggccgtcctcaccaggcagcccacagagggtcgctccaga
gacggaggtctgcgtctgggtgagatggagcgcgactgtctgatcggctacggagcgagc
atgttactgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgtgga
cagtgtggtctgttgggatactctggatggtgtcactactgtaaatcttcctgccacgtc
tcctccctgagaatcccgtatgcctgcaagcttctgttccaggagctgcagtccatgaac
atcatccctcgactcaagctgtcacggtacaatgactga
DBGET
integrated database retrieval system
