Cololabis saira (Pacific saury): 133450352
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Entry
133450352 CDS
T09849
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04217
Necroptosis
csai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133450352 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133450352 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133450352 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133450352 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133450352 (si:dkey-32e23.4)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
133450352 (si:dkey-32e23.4)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
133450352 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
133450352 (si:dkey-32e23.4)
RhoA-dependent endocytosis
133450352 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
133450352 (si:dkey-32e23.4)
Retention of mitochondria
133450352 (si:dkey-32e23.4)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133450352 (si:dkey-32e23.4)
BRITE hierarchy
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
DUF2770
AAA_16
Motif
Other DBs
NCBI-GeneID:
133450352
NCBI-ProteinID:
XP_061584891
LinkDB
All DBs
Position
9:complement(24336987..24345799)
Genome browser
AA seq
678 aa
AA seq
DB search
METLIPTINRLQEVFLTVGAEVIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLINVAPLQERLQTENGNRVKQNGQNSYPGVSAEEWGTFLHCKNQIFTDFMEIRR
EIEAETERSSGDNKGIGSEPIYLKIFSPNVLNLTLVDLPGITKVPVGDQPENIEEQVQEM
ISSFISNPNSLILAVSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEV
LLGRVIPVRLGIVGVVNRSQHDINIQKSLEDSMKDEQTFLQRHYPSLASRAGSRYLAKTL
SRLLMHHIRECLPELKTRVTVLSAQYQARLNSYGQPVEDYSATLLQIVTKFASDYCNTIE
GTGRHIQTSELCGGARICYIFHETFGRTLQSIDPLGGLSDLDILTAIRNATGPRPALFVP
EVSFELLVKRQIKRLEEPSLRCVELVHEELQRIIQHCSSFSTQELLRFPKLHDSIVEVVT
GLLRKRLPITNEMVHNLVAIELAYINTKHPDFADAAQVSASVNSQLISCFQAEALDGGKR
WKNEKVPEDKTSATSFGSPSKGQAINLLDTAVPPSRKLSTREQRDCEVIQRLIKCYFLIV
RKSIQDSVPKTVMHFLVNNVKEHLQSELVGQLYKQQLLQGLLIESQDTAQQRTEVAQMLE
ALKKANNIISEIRETHLW
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctgattcctactatcaaccggctgcaggaggtctttctgactgtgggagca
gaggtcatacaactacctcagatagtcgtggttggatctcagagcagtgggaaaagctct
gtgttggagagcctggttggcagggatttcttgcctcggggatcaggaattgtcacaaga
cgacctcttgtgttgcaactcataaatgttgcccctttgcaggagagactgcagactgaa
aatggaaatcgggttaaacaaaatggccaaaacagctacccaggcgtcagtgctgaagaa
tggggtacgttcctgcactgcaagaaccagatctttacagattttatggaaatccgtcgg
gaaatcgaggcagagacggagcggagttcaggagacaacaagggcatcggttccgagccc
atatatttgaagattttctccccaaatgtgctcaacctcacgctggttgatttacctgga
attaccaaggttcctgttggggaccagccagagaacattgaagaacaagtgcaagagatg
atttcttccttcatttccaacccaaactctcttatcctggcagtgtcccctgccaactct
gacttagccacctctgatgcactgaaattagcccgtgaagttgatccagatggtcgtcga
acgctgctggtggtcagtaaactggacctgatggatgcaggtactgatgcactggaggtc
cttctgggtcgagtcattcctgtcaggctcggtattgtcggagtggtaaacaggagccag
catgacatcaacatccaaaagagtctggaggactcaatgaaggatgagcagaccttcctg
cagcgccactacccctccctcgcgtcccgtgcaggctcacgttatctggccaaaactctg
agcagactgctcatgcaccacatacgagagtgtctgccagagctcaaaacccgagtgact
gtgctgagtgcccagtaccaggcacgactcaacagctacgggcagccggtggaggactac
agcgccaccctgctgcagatcgtcaccaagtttgctagcgattattgcaacaccatagag
ggaacaggcaggcacattcaaacatcagagctatgtgggggcgctcggatctgttacata
ttccatgagacttttggccgcaccctgcagtctatcgaccccctgggaggactgagtgat
ctagatatcctcactgctatccgcaacgccacgggtccacgtccagcactttttgtgccc
gaagtgtcttttgagttgttggtgaagcggcaaattaagcgtctggaggagcctagtttg
cgctgcgtggaactcgttcatgaagagctgcagaggatcatccagcactgctcctctttt
agcacacaggagctcctgcgatttcccaaattgcatgactccattgtggaagtagtgact
ggattactgaggaagcgcttgccaattactaatgaaatggtgcacaatttagtggcaata
gagcttgcctatatcaacacaaaacacccggacttcgcagatgcagcgcaggtctcagca
tccgtcaacagtcagctgatttcttgctttcaggcagaggcccttgatggagggaagcgc
tggaagaatgagaaggttccagaggataaaacttctgccacaagctttggcagccccagc
aaaggccaggccattaacctccttgacacagctgtgccgccatcccgcaagctaagcacc
cgggagcagagggactgtgaggtcatccagcgcctcatcaaatgttatttcctcatcgtc
cgcaaaagcatccaagacagcgtgcccaagacagtcatgcactttctggtgaataatgtg
aaggagcatctgcagagcgagcttgtgggtcagctttacaagcagcaacttctgcagggg
ctgctcatcgagtcacaggacacggctcagcagcgaaccgaggttgcccaaatgctagag
gcacttaaaaaagcaaataacatcatctctgagatccgggagacccatctgtggtag
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integrated database retrieval system
