Cololabis saira (Pacific saury): 133457432
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Entry
133457432 CDS
T09849
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein isoform X1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00531
Glycosaminoglycan degradation
csai01100
Metabolic pathways
csai04142
Lysosome
Module
csai_M00076
Dermatan sulfate degradation
csai_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
133457432 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133457432 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
csai02042
]
133457432 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133457432 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
csai00537
]
133457432 (si:dkey-72l14.3)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
133457432 (si:dkey-72l14.3)
Bacterial toxins [BR:
csai02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
133457432 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Enzymes
133457432 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
csai00537
]
Enzymes
133457432 (si:dkey-72l14.3)
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_56
MycE_N
Motif
Other DBs
NCBI-GeneID:
133457432
NCBI-ProteinID:
XP_061592691
LinkDB
All DBs
Position
12:complement(35383643..35404439)
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AA seq
570 aa
AA seq
DB search
MAWTEPQIHPDPQLQPKRTFGNLLSTFSSAIVLLTSLGAFAGPCRAGPPQPARPPLLSGQ
PFIIFWGVLDSSCPGRPDPTSFGMEREGRVAIFYEDTLGDYPYFIDKNTPVNGGLPQNTR
LDGHIQKTQQDLETALTAPRYLGLGVLRWAEWVPQWARSRDKQPMYLEASRNLMKSFFPN
WTPEEVEKWSRIDFEAAAQSVMMETLREVKRLRPKALWGFSPYPTCYNTDPTQTSLSNFT
GQCPPADTALNNELLWLWKRCSALYPLLTLEKVQGGTSGARLYLSGVIKEALRVSSLAGA
DFDLPVFPLIRSVYASTKTFLSQADLVNAIGESAAMGTAGVVIWDRSETKTERECQDLAE
FVRKVLGPYSSNVTAATQLCSASLCQGKGRCVRQNPSSSAYLHLPPPSTAAGKAEAAKAT
EQPDTDTKTVEPDPAEIWKKDFQCQWYKTADGDVSDRQPPKDGVGGTTEGNSEGAVGNAE
GAAGNSEVAAGNSEVAAGNSEGAAPSAGTTTEPTRKSSSETKFAGTGSPGTESPTPSLKA
ATDTAGISPVSGPNLTILLLVLAASLCLSP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggacagaaccgcagatccatccagacccacagctgcaaccgaaacggacgttt
ggcaacctgctgtcgacgttctcctccgccatcgtcctgctcacgtcgctcggtgccttc
gccggcccctgtagggccggtccacctcagcctgcccgcccccctcttctgtccggacag
cccttcatcatcttctggggcgtcctcgactcctcctgccccggccggccggatcccacg
tcctttgggatggagcgcgagggccgcgtggccatcttttatgaagacacgctcggggat
tacccttatttcatagacaagaacaccccggtcaacggggggctgccgcagaacacgcgc
ctagacggccacatccagaagacgcaacaggacctggagacggccctgaccgccccccgg
tacctgggcctcggggtgctgcgctgggccgagtgggtgccccagtgggccaggagcagg
gacaaacagcccatgtatctggaggcctccaggaacctgatgaagtctttctttcccaac
tggaccccagaggaagtggagaaatggtcacggatagacttcgaagcagccgcccagtcc
gtcatgatggagactctccgggaggtcaaaaggttgagacccaaagcattgtggggtttt
tctccgtaccctacctgctacaacaccgaccccacccaaacctccttaagcaatttcacc
ggccagtgccccccggctgacacggccctgaacaacgagctgctgtggctctggaaacga
tgctcggccctctaccctctcctgaccctggagaaggtgcagggtgggacctctggagct
agactgtatctatccggtgtgataaaagaagcgctacgagtatcatctcttgccggagcc
gactttgacctgcctgtattccctctgatcaggagcgtctacgcctcaactaaaaccttt
ttatcacaggctgacctggtcaacgctataggagaaagtgctgccatgggaacagcagga
gtcgtcatctgggatagaagtgagactaaaacagagagagagtgccaggacctggcggag
tttgtccgcaaagtcttgggaccatactcctccaacgtcaccgcggcaactcagctctgc
tcagcctccctctgccagggaaagggtcgatgcgttcgtcagaaccccagcagctcggcc
tacctccatctcccaccgccatccacagcggcaggcaaggcggaggcagctaaagccaca
gaacagccagacacagacactaaaacagttgaaccagatccagctgagatctggaaaaaa
gacttccagtgccagtggtacaagaccgcagacggggacgtctcggaccggcagcccccc
aaagacggggtgggaggaacgacagagggaaactctgaaggtgcagtgggaaacgctgaa
ggtgctgcaggaaactctgaagttgcagcaggaaactctgaagttgcagcaggaaactct
gaaggtgctgcaccttcagcaggaacgacgacagaacccacgaggaaaagttcctctgag
accaagtttgcaggaactggttcacctggtaccgaaagtccaacgccttcactgaaagcg
gccacagacacagctggtattagtccagtcagcggcccgaacttgactattttgctgctg
gtgttggctgcaagtttatgcctgagtccttaa
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