Cololabis saira (Pacific saury): 133458635
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Entry
133458635 CDS
T09849
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133458635 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133458635 (tprb)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133458635 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
133458635
NCBI-ProteinID:
XP_061594748
LinkDB
All DBs
Position
13:35186226..35221070
Genome browser
AA seq
2366 aa
AA seq
DB search
MAALLLQELDPPEVSKLPKTLQNKLEKLLSDQQYKIDSLKAQQEQFRVDSEQQFFEKVKQ
LSQCQEEFLTKTQDHHRLKEELNKLEEELNSSRDKNREYESTQDKLSSEQTFLSKAKEEL
ESEKRDLVRTLERRSLEVEHLNDDMRQLNDKLVEVSSSKMALQMKLDDFETVEVNIKYKE
KRMEQEKGLLHGQISWLNGELKSKTEELLSLSRQKGNEILELKCVLENKEDEFNKVQEQV
GSLKTSNEHLQKQNEEMISKLKETKDQQATMEEKFRNELNANIKLSNLYKGAAADSEAKS
DELSHAVDELHKLLKDAGEANKALEEKLQEMNGATDKSVSELTDRIQSLEKELESANDLL
SSSKLRGPGTSVLTEEQMTAMSPTAAAVSKIKPGMKLTELYVAYVESQEQLQLERLENKR
INKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAFKEVHRLQNDADEANKR
SSVLERENQRSDLQLSDMAQQVRVLLVELEEARGNHVIQEGVSSADISSTSEVISQHLVT
FRSIEELQKQNQRLLVALRELSDAQEKEEFEATGNRGGELEQCLEQAQAELESLKEQRSK
HIKMTESVVRQRDMYRVLLAQATGVSFPPQGTPPEEFSLTSTPRGSPAATPTKGTPTTLV
SMGADSTEAVEARAALRQLQEVFSTYKKERVDSDKAMTQQNEKLLEQLSDLRAQNAKTST
QLEFASKRYEMLQDNVEGYRKEIASLREKGQKMTATTQNLEQTINTLKEDLKSATEKLNL
TEGHAENLRKERDMLKLVESTLTQEKKSIAGQQQSQNLLLSNLQAIQATLERSEMDTRQR
LNSQLEKQEREISHLQKRLEGEVEQRHLLTRNQEIHLMDVRRQLETQVALHQKTKELLSA
AEMELHTLRMQQGSIEAHRTLGSPSTPNIRVSSLQSSDQDRDHLQSRLQLAESRVEELTE
NLRAATSSLEQYRAMAQSLEESLDKEKQVTEQARSSIEVRIKEAEEQHRRLEEKLLEAEK
EKQDLEDQKKRALASLEEQINGLKRSLSGAQADHQAALQQVAVAETHQRQALQDSQEQAK
MAAEAQDKYEREMMLHAADVEALQAAKARAQKADEFRHQLEDKAQRVGAELLEARVSWEE
QEKIFKEETSKAESRCDELQKQNTLLHEQVQTMSSKMAANIQRAANESALNVSLTEEGKS
QDQLLEILRFVRREKEIAESRFEVAQGESLRYRLRVEHLERELKEAQDSLSAERERMQVT
AKTLAQHDELMKKTETMSILMETNKMLREEKNQREQDLQQTQAKVQRLESDIMPLQQANS
ELSEKNGMLQAEKTILEEDIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEVHLKRIQQLN
EENTRLKAEVSRSNNLTTSLQSQIQGLRDISNKTTDARNMLKRQLETKNQELLEKNRTIT
QVKKIGRRYKTQYDELKVDHEKLVAEAAAGPSQDEEARQASVQEVQTLRDSLSQAETKTK
ELEGQLENINKVATERETDMREQSSRLTTELNRLRQELQHKASQEDNLRQQMAEKEEKTR
KALVNAKQKIGQLSAIKDQLQKENEELKKVHEELEVRMSALKSQFEVRLSRQERELRELR
GQQERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKTTPVADRGSASTSEPPTANIKPTPV
IATASKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGPPVE
HVTVYGSASGSVRSASPNVQTTLANPMLTVQQIQTQTTAFVQPTQQQSVTHTEPSNQEPP
PMVIEATPSSQVEWPSTSSTSSVFGTVSATPGTSAMSKRPREEEESSTVVTDTEASQEET
PRAPIAKKLRIIQRVDPEEEVLAEESAEAEGVVPTDGQEDAEASQSEEFANMEEGDDGEA
SQTATMEQEGTRITGETPDQLQQEVIVILTDSESEEHEEEDEEEEEQDYEEEEEEDDEEE
EEDEEEEEEEEEEEEEEEEDDGGMGEEGEDSNDGSGDGNEAYEGDDTEGADVTDPGTETE
ESMGATDSTQRPADSQTPSFEGSSMEAFPAEQPITSSGTRMPQSPRRPMQQLPPRLNIHT
TSTSELGPPAQVQRIPVRRQSVGRLTPGMAGGAQHFYDEDDRMVPSTPTLVVPHRPDGFD
QAIHSPQVTGVPRFRFGPPEDMPQAASSSHSDLGQLASQGGLGMYESPLFLAHDEESGGR
SVPTTPLQASAPVTVFSEAAQSDATEHASQSVPTVSTSTPALVVPASTGEERDDVFLEPD
TDRASAEASVDPVASQEDVEESSQSPDKPSLSSTSQEPSSSSADTSSAPPKPSRPGPSRQ
LQRWPESRGGRMKRGGQALPGRRFAR
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcttgctgcaggagttggatcctcctgaggtgtccaaactccccaaaaca
cttcaaaacaagctcgaaaaactcctttcagatcagcagtataaaatagactcactgaaa
gctcagcaagaacagtttcgggtcgacagcgagcaacagttttttgaaaaggttaaacag
ctttcacaatgtcaggaagagttcttgaccaagactcaagaccatcacagactcaaagag
gagctgaacaaacttgaggaggaactcaatagttctcgtgataagaacagagaatatgaa
tctacgcaggacaagttgtcatcggagcagacttttctgtcaaaagccaaagaggagctg
gagtcagagaagcgagaccttgttcgaaccctggagaggagatcgctggaagttgagcat
ttaaatgatgacatgaggcagctcaatgataagttagtagaagtcagcagctctaagatg
gctctgcagatgaagttggatgacttcgaaacagtagaagtcaacataaaatacaaagag
aagcgtatggagcaagagaagggactgctgcatggtcaaatttcatggctgaacggagag
ctgaagtccaaaacggaagaactgctgtctctgtcccggcaaaagggtaatgaaatcctg
gagctgaagtgcgtcctagagaataaggaagatgagtttaataaagtccaagaacaagtg
ggcagtttgaagacttccaatgagcatcttcagaaacaaaatgaagagatgatcagcaaa
ctcaaagaaaccaaggaccaacaggccaccatggaggagaagttcagaaatgagttgaat
gccaacattaagcttagtaatttatacaagggagcggcagcagattctgaggcaaagagt
gacgagctgagtcatgccgtagatgaactgcacaaactgttgaaagatgctggagaagcc
aacaaggctcttgaagagaagctgcaggaaatgaacggtgccacagacaagagtgttagt
gagttaacggacaggatccaaagccttgagaaagagctggaaagtgccaacgacctgctg
tcaagttccaaacttagaggccctggcacatctgtgctgacagaggagcaaatgacagca
atgtctccaacagcagctgctgtctccaaaataaagcccggtatgaagctgactgagttg
tatgttgcatatgtggagagccaggagcagttgcagttggagcgattggagaataagcgg
atcaacaagtatctggatgacattgttcaggaagtagaagcaaaggcccccatcctcaaa
cggcaaagggacgagcatgagcgcatgcagaagtcagtggccagtctttcagccaagttg
gagcaagcttttaaggaggtgcaccgactacaaaacgatgccgatgaagccaacaagcgc
tcatctgtcctggaaagagagaaccagaggtctgacctccaactgtctgatatggcacaa
caggtccgtgtgctgttggttgagctggaagaggcgcgtggcaaccacgtcattcaagaa
ggcgtgagctcggcagatatcagcagcacttcagaagtgatcagtcagcacttggtgacc
ttccgcagcatagaggagcttcagaagcaaaaccagcgtcttctagtggccctcagagag
ctcagcgatgctcaagagaaagaggagtttgaagccaccggcaacaggggtggggagctg
gagcagtgtttggagcaagcccaggctgagctggagtctttgaaggagcaacgcagcaaa
cacataaagatgactgagtccgtcgtgaggcagagagacatgtaccgtgtgttactggct
caggcaactggagtcagcttcccaccacaaggtactccacctgaggagttctctttgacc
tcgacccctcgaggttcaccagcagccactcccaccaaagggacccctactacgctggtt
tctatgggtgcagactctactgaagcagtggaggccagggctgctttgagacagctacag
gaggtgttctccacctataagaaggagcgggtggatagtgacaaggccatgacccagcag
aatgaaaagttgctggagcagctctctgaccttcgcgctcagaacgccaagacatccacc
cagttagaatttgcctccaagaggtatgaaatgctgcaagacaatgttgaagggtacaga
aaggaaattgcttcacttagagagaaaggacagaagatgacggctacaacacagaacctt
gagcagaccatcaacacgttgaaagaggatcttaaatctgccacggagaaactcaactta
actgagggccatgctgagaatttgcgcaaggagagagatatgctgaagctggtggagtcc
acgctcacccaggagaagaagtcaatagcgggccaacaacagagccagaacctgctgctg
agcaacctccaggctatccaggccaccctcgagcgttcggagatggatacacgtcagcgt
ctcaacagccagcttgagaagcaggaacgggagatctcccacctccagaagaggcttgag
ggggaagtggaacagcgccacctgctcaccagaaaccaggaaatccatttgatggatgta
aggaggcagttggagacgcaggtggcgttgcatcagaaaaccaaggagctactcagtgct
gctgagatggagctccataccctcaggatgcagcaaggcagcattgaagcacatcgcacc
ctgggctccccatccacacccaacatcagagtttcaagcctgcagagttcagatcaagac
agagaccatctccaaagccgcttacagctggctgaatctcgagtagaggagctcacggag
aacctccgggccgccacctccagtctggaacagtacagagccatggctcagagcctggag
gagtccctggacaaagagaagcaggtaacggagcaagcccggtcgtccattgaggtccgc
attaaggaagctgaggagcagcaccgtagactggaagagaagcttctggaggcagaaaaa
gaaaagcaagacttggaggaccagaagaagagagctctggcctctctggaggagcagata
aatggcctgaaaagaagtctcagcggcgcccaggccgaccaccaggcggcactgcagcag
gtggctgtagctgaaacccaccagcggcaggctctgcaagacagccaggagcaagctaaa
atggcagctgaggctcaagataagtatgagcgggagatgatgctgcatgcggccgatgtg
gaggccctccaggccgctaaggctcgagcccagaaggctgacgagttcagacaccagctt
gaagacaaggcccagagggtcggtgctgagttactggaggctagagtctcctgggaggag
caggagaagatcttcaaggaggagacgtccaaagctgagagccgctgtgatgagttgcag
aagcagaacactctcctgcatgaacaagtccagaccatgagcagcaagatggcggctaat
atacagcgtgctgccaatgaaagcgccttaaatgtatctttgactgaagaggggaaatct
caagaccaacttcttgaaatactcagatttgtgcgtcgggaaaaggagattgctgaatct
cgctttgaggtggcccaaggggagagtttacgttaccgtttgagagtggagcacttggag
cgagagctcaaggaagcgcaggacagcctgagtgctgagagggagagaatgcaggtgact
gcaaagactctggctcagcatgatgagctgatgaagaagactgaaacaatgagcatcttg
atggagaccaacaagatgctgagagaggagaagaaccaaagggaacaggatcttcagcaa
actcaagctaaggtacaaagactagagtcggacatcatgccgctgcaacaggctaactct
gaactgagtgagaaaaatggcatgcttcaggcggaaaaaactatactggaagaagatatc
aagcgctggaaagcacgaactcagcatttggtgagtcagcagaaagattcagatcctgag
gagtataagcgtcttcattctgaaaaggaggtacatcttaaacgcatccagcagctcaat
gaagagaacacaagactcaaagccgaggtgtccaggtccaataatctcacaacgtccctg
cagagccagatacagggtttacgtgacatttcaaataaaacaaccgatgccagaaatatg
ttgaaaaggcaattggagactaagaaccaggagctcctggaaaagaatcgaaccatcacc
caggtcaagaagatcggacggcgctacaagactcagtatgatgaactcaaggtggatcat
gaaaagctggtggcagaagctgcagcaggaccgtcccaagatgaggaggcacgtcaagcc
tcagttcaagaagtgcagaccctccgagattctctgagccaggctgaaaccaagaccaaa
gagctggaagggcagctggagaacatcaacaaggtggccacggagcgagagaccgacatg
cgggaacagtcttccaggttgacgacggagctgaacaggctgaggcaggagctgcaacat
aaggcttctcaggaggacaatctgagacagcagatggctgaaaaggaggagaaaaccagg
aaggctctcgtcaatgccaagcagaagatcggccagctttcagccatcaaggaccagctg
cagaaggaaaatgaggaattgaagaaggtgcacgaggagctggaagtgcgaatgagtgct
ctcaagtctcaatttgaagtacgtctcagtcggcaggagcgagaactcagagaactacga
ggtcaacaagagagacaagagcagagagatgagccacctgaggctggtcccagcaagact
caggagcagcagaggagcacagagcagaggcagatcagcctgaaaaccaccccggttgca
gacagaggaagcgccagcacctccgagcctcccaccgccaacattaagccaacgcctgtg
atcgctacggccagcaaacagcccgtcaacccagggaacaaacccactccaagagcaagc
ataaggcccatgataaccccggccacggttcccactccaacacccaccgctacagtcatg
ccaaccacacaggtggagactcaggaagcaatgcagtctacagaagggccgcccgtggag
cacgtgaccgtgtacggcagtgccagcggctccgtccgctccgccagccccaacgtccag
accaccttggccaaccccatgctgactgttcagcagatccagacgcagaccacagcgttt
gttcagccgacgcagcagcagagtgtgacccacacagaaccatccaatcaggagccgccg
cccatggtgatcgaggcaacacctagctcacaggtggagtggccttccacatcctcaacc
tcctctgtgttcggaacagtttcagcgacaccaggaacctcggccatgtccaagaggccc
cgggaggaggaggagagcagcaccgtggtcacggacaccgaggcatctcaggaggaaacc
ccaagggctcctatagcaaagaagttgcgcatcatacaacgagtggatccagaggaggag
gtgctagctgaagagagtgctgaggctgaaggggtcgtgccaacagacggtcaagaggat
gcagaagcgagccagtcggaggagtttgcaaacatggaggaaggagatgacggtgaagcc
tctcagactgccacgatggagcaagagggcacccggatcacgggtgaaacccctgaccag
ctgcagcaggaagtaatcgtcatacttactgacagtgagagtgaagaacacgaagaggag
gatgaagaagaagaagagcaggactatgaggaggaggaggaagaagatgacgaagaagag
gaggaggatgaagaagaagaggaggaggaggaagaggaggaagaagaggaggaggaagac
gatggagggatgggggaggaaggagaggacagcaacgatggaagtggagatggcaacgag
gcttacgagggagatgacacagagggggctgatgtaacagacccaggcacagagacggag
gagagtatgggggcgacggactccacccagaggccagcggattcccagacacccagcttc
gaggggagttcaatggaggccttcccagcagagcagcctatcacgagttccggtacccgt
atgcctcagtcgccacggcgaccaatgcaacagctgcccccgcgcctcaacatccacacc
acctccacatccgaactgggacctcctgctcaggttcaacgtatccctgttcgtcgccag
tcggttggcaggctgacaccaggaatggcgggcggtgctcagcacttctatgacgaagat
gacaggatggttcccagtactcccactctggtggtgcctcatcgacctgatggttttgac
caggccatccattctccccaggtgaccggggtccctcgcttccggttcggtcccccagaa
gacatgccgcaggccgcttcctcctctcactcggacctgggacagctggcgtcacaagga
ggtcttgggatgtatgaaagtcctctgttcttagctcacgacgaggagtctggtggacgc
agtgttcccaccacaccactacaagcctcggcgccagtaacggtcttctcagaggcggcc
cagtctgacgcaacagagcacgcctcccagtcggtccccacggtgagcacgtccacgcca
gccctggtggtgccggccagcaccggcgaggaaagagacgacgtcttcctggagccggac
actgatagggccagtgctgaagcgtcagtagatcctgtggcatcccaggaggacgtggag
gagtcgagccagtcccccgacaagcccagcctttcctccaccagccaggagccttcctcc
agctctgcagatacaagcagcgctccacccaaaccctctcgccctggaccgagcagacag
ctgcagcgctggccggagagccgcggtggacgcatgaagagaggaggtcaggccttaccc
ggaagacgatttgcaagatga
DBGET
integrated database retrieval system
