KEGG   Chryseobacterium salivictor: NBC122_00105
Entry
NBC122_00105      CDS       T07515                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
csal  Chryseobacterium salivictor
Pathway
csal00740  Riboflavin metabolism
csal01100  Metabolic pathways
csal01110  Biosynthesis of secondary metabolites
csal01240  Biosynthesis of cofactors
csal02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:csal00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NBC122_00105 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NBC122_00105 (ribD)
Enzymes [BR:csal01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NBC122_00105 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NBC122_00105 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD SNAD4 APOBEC_N DUF2113 APOBEC3 Cupin_5
Other DBs
NCBI-ProteinID: QBO56963
UniProt: A0A4P6ZBX0
LinkDB
Position
114746..115768
AA seq 340 aa
MNHEIYMRRCVDLAQKALGQTYPNPLVGCVIVHNNEIIGEGFHEKAGCAHAEINAINSVK
NKALLKESTIYVSLEPCAHFGKTPPCANKIVETGFKKVVIGTLDAHDKVNGKGKQIIEDA
GIEVISGILEKECRELNRRFFTFHQKRRPYLILKWAESGDGFLDQDFKPTQIGNALTRQF
VHQLRSEEHAILVGTNTALTDNPSLTTREIVGRNPVRILIDFDLKVPAHFNLYNDEAETL
VFNAVKNSVERNITFIKIKRENFIENLMEKLSEQQIQSVIIEGGRFTLQQFIGQNLWDEA
IIIKNENLHLIHGTKAPVFNFEKFETKQFRDNRIEFYKNS
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaaccacgaaatttacatgcggcgctgcgtcgatctcgcccaaaaagctttagggcaa
acctatccaaatcctttggtcggttgcgtaattgtacataataacgaaattatcggcgaa
ggatttcatgaaaaagcaggttgtgctcacgctgaaattaatgcaattaactctgttaaa
aacaaagcattgttaaaggaatctacgatctatgtttcgctggaaccctgcgcgcatttc
ggaaaaacgcctccgtgcgccaacaaaattgtagaaaccggtttcaaaaaggtggtcatc
ggaactttggatgctcacgataaagtgaatggaaaaggcaaacagattatagaagacgca
ggaattgaagttatttccggaatcctggaaaaagaatgtcgggaactgaacaggcggttc
tttactttccaccaaaaacggagaccttatcttattttgaaatgggccgaatccggtgat
ggttttttagatcaggattttaaaccgactcaaatcggtaatgctttgaccagacaattt
gttcatcagcttagaagtgaggaacatgccattttagtaggaacaaatacagctttgacc
gacaatccaagtttgacaacgagagaaattgtgggaagaaatccggtgagaattttaatc
gattttgatttaaaggttcctgcccattttaatctatacaatgacgaagcggaaacgttg
gttttcaatgctgtgaaaaattcagttgaaagaaatattacttttattaaaataaaaagg
gaaaacttcatagaaaatctaatggaaaaattatctgaacaacagattcagtcggttatc
attgagggtggacgttttactttgcaacagtttatcggccaaaatctttgggatgaagca
attatcattaaaaatgaaaatctgcatttaattcatggaacaaaagcgccggtatttaat
tttgaaaagttcgaaacaaaacaatttcgggacaatcggattgaattctataaaaattct
taa

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